Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_35750 |
Symbol | PRO3 |
ID | 4838804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 105023 |
End bp | 105856 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640390119 |
Product | delta 1-pyrroline-5-carboxylate reductase |
Protein accession | XP_001384320 |
Protein GI | 126135592 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTGA AAGACTACAC CATTACCGTT TTGGGCTGTG GAGTGATGGG CACGGCCGTT TCTTCAGCCA TTCTCAAATC CAAGGTTGAA CCCTTTCCAG CTAAGCTTAT TGCCTGCAAC ACAACTGAAG CAGCAGCTAC TTTGGCTCTA GAGACTTTGA ACAGCCCCAT CGTTGAGCAT TCGTTCGGCT TGGAATCGAA CAGAAAGGCT GTCTCCCAAG CCGACGTTAT TATCCTTGCT TGTAAGCCAT TCATGTACCA GACTATTTAT GATGAGGTCA AGGACTCTTT GACTGGAAAA CAGTTGCTCA TTTCTTTATT GGCTGGAACT ACTATCTCTG AATTGACAAT TTTCACCCCC TATGTGGCCA AGGTTATGAC CAACACCCCA GCGCGTTTCG GATGTGGTAC TGCTGGTATT TCGTTTTCGC CAGAAGCTGA AGCTAAGTAC GAAGACTTGG TGTTGAAGTT GATTGGCACT GTTGGAGAGG CATTCAAGAT CCCCGAAAAG AACATGGACG CCGCAACTGC GCTCATTGGC TCTGGTCCAG CCTTCTGTTT GTTAATGATG GAGTCTTTAA TTGACGGAGG TGTTCGTATG GGCTTGCCAT TCGAAGTAGC CAAGTTATCT GCTGCCAAGG TCATGGAAGG TACTGCCAGA ATGGTTCTTG AAACTGGAGA CCATCCTGCT GCATTGAAGA GTATGGTGTG TACACCTGGA GGAACTACCA TCGGTGGTTT GTTGAAGATG GAAGACGCAG GTGTCAGGGC AGGTATTGCC AGAGGTGTAG AAGAAGCTGC GGTGATCTCT GCTTCATTTG CAAAGAAGAA GTAA
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Protein sequence | MTLKDYTITV LGCGVMGTAV SSAILKSKVE PFPAKLIACN TTEAAATLAL ETLNSPIVEH SFGLESNRKA VSQADVIILA CKPFMYQTIY DEVKDSLTGK QLLISLLAGT TISELTIFTP YVAKVMTNTP ARFGCGTAGI SFSPEAEAKY EDLVLKLIGT VGEAFKIPEK NMDAATALIG SGPAFCLLMM ESLIDGGVRM GLPFEVAKLS AAKVMEGTAR MVLETGDHPA ALKSMVCTPG GTTIGGLLKM EDAGVRAGIA RGVEEAAVIS ASFAKKK
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