| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35457 |
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| Symbol | SIR1 |
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| ID | 4838077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 515285 |
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| End bp | 516220 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640389392 |
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| Product | transcriptional regulatory protein |
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| Protein accession | XP_001383374 |
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| Protein GI | 150864526 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0738163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.450522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAAAC AGCTAGTCGA GTTCCAGGAG TACCTCAAGA CATGTCGCAA GATCGTTGCG
CTTGTGGGGG CAGGACTATC AGTGTCTTCC GGGTTACCGA CTTTTCGAGG TTCTCAAGGC
TTATGGAAGA ATTTTAACAT GATTGACTTG GCTACTCCAG ATGCATTCTA CATTGACCCA
GGATTGGTAT GGCAATTCTA CTCGTGGCGA AGGTATAACG CCCTTCAAGC AAAACCAAAT
AAGGGCCATT TGGCCCTAAG TGCACTTTCG AATTTGGCTA CAAGGAAGGA TTCTAATCTC
GAGTATATCA CTATTACTCA GAATGTAGAT GGCTTGCTGA GCCGAAGCGG ACATGCTAAG
GAGAACCTCT ACGAGATCCA CGGCTCATTG TTCAATTTAA ATTGCACCAG CTTCATGTGC
AACTATGTAG ATAGAAACAA CCTCAAGCAT CCACTCACAA AAGCTCTAGA AGGCACAGAG
TATGAATACG ATAGAAAGAA CAGAAAGAGA AGTTTGGAAG AAGACGATTC CAGTCACCAA
GTGGACTATA GCATATCACC GCAGTTTCGA CCGGTTAAAA ACATTCCAGA GCTGGAACTC
CCGCAGTGTC CGGTTTGCAA GGATGGGTCT TTATTACGAC CCGGAGTAGT TTGGTTTGGC
GAGTCTCTCC CACTCAACGT AATGAACTCT GTAGACAACT TCATAGAGCT GAACAACTCG
GTGGACTTAA TCCTTGTTAT TGGAACTAGT GGAACCGTGT ATCCGGCGAA TAGTTATGTA
GACAGAGTCA AGGTCAAGGG AGGAAAAGTG GCCATTTTCA ATACCGATAT CGAAGAGGAT
ATCTTACAGG GAATTGTCAA GGATACGTGG GGGTTTCGTG GTGATGCCGC CGAGTTGCTC
CCGATAGCAT TAAAGCCAGT CATTGGCGAA GTATGA
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| Protein sequence | MSKQLVEFQE YLKTCRKIVA LVGAGLSVSS GLPTFRGSQG LWKNFNMIDL ATPDAFYIDP
GLVWQFYSWR RYNALQAKPN KGHLALSALS NLATRKDSNL EYITITQNVD GLSSRSGHAK
ENLYEIHGSL FNLNCTSFMC NYVDRNNLKH PLTKALEGTE YEYDRKNRKR SLEEDDSSHQ
VDYSISPQFR PVKNIPESEL PQCPVCKDGS LLRPGVVWFG ESLPLNVMNS VDNFIESNNS
VDLILVIGTS GTVYPANSYV DRVKVKGGKV AIFNTDIEED ILQGIVKDTW GFRGDAAELL
PIALKPVIGE V
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