Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34974 |
Symbol | GRP2.2 |
ID | 4836807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 967852 |
End bp | 968862 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388122 |
Product | NADPH-dependent Cinnamyl-alcohol dehydrogenase. |
Protein accession | XP_001382959 |
Protein GI | 150864224 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.577054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAGA CTACCGTTTT TCTTTCGGGT GCTACTGGTT ACATCGCACA ACAAATAATT GTTGAGCTTC TTTCCAAGGG CTATAATGTG GTTGGTTCAG TAAGATCTCA AGAAAAAGGA GAGAAGTTGA AGTCTTACTA CGGTGAACAC TTTCAATATG TTGTTGTACC TAATTTAGAA CAAAAGGGTG TTTTCGATGA AGCCTTGAAG AAGCATCCTG AAGTGACTGT ATTCATTCAC ACTGCATCTC CAGCAACATT CTCTCCCGAA GACAACGAGA GGGATACCTT GATTCCTGCT ATCGACGGCA CTGTTAATGC CTTGCAGGGC ATTGTGGACC ATGCTCCTCA GATTAAGAGG GTTGTTTTGA CAGGCTCTAC TGTCTCTACT GTTGATATTG CTGATTTCAC AGATCCTACC TTTTTTATGA ACGAAGACTC GTGGGCCAAA GTCACTTATG AAGATGGAAA GACCAAGGAT GGTCTTACCG CTTACTGGGC TTCCAAGAAG TACGCAGAAA AGGCAGCCTG GGAGTTTGTA GAATCCAAGA AACCAAACTT CACTATTTCT ACAATCCTTC CTGCTTATGT GTTTGGTCCT CAAGCACAAG ATGCTGAAGC TAAGGGTCAG TTGAACTTGA CTGCCGAAAT CGTTGGAGGT TTTTACCGTT TATCCAAGGA CGATAAGGTT CCTGAAGTAG CCGGTCCTTT CGTTGACGTC AGAGATGTAG CCAAGGCTCA TGTCATTGCT TTCGAGAAGG ATGAAGCACA GGGACAAAGA ATCATCACAT CCAATGGTAG ATTCAGTTCA CAGTTGATCT TGAACATCAT AAGAGAAAAG TTCCCTGAAC TCAGAGAGAA GTTGCCAGTT GGAGTTCCTG CCAATGGCAA AGTTCCTGAG TCTGATCTGT GGGATGACAG TAAGTCTAAG AAATTGTTGG GTTTCAAATT CTCTGATATT GAAAAGGTAG TTGTCGATAC TATCGAGCAA GTGATCAGAG CCAACGAATA A
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Protein sequence | MSKTTVFLSG ATGYIAQQII VELLSKGYNV VGSVRSQEKG EKLKSYYGEH FQYVVVPNLE QKGVFDEALK KHPEVTVFIH TASPATFSPE DNERDTLIPA IDGTVNALQG IVDHAPQIKR VVLTGSTVST VDIADFTDPT FFMNEDSWAK VTYEDGKTKD GLTAYWASKK YAEKAAWEFV ESKKPNFTIS TILPAYVFGP QAQDAEAKGQ LNLTAEIVGG FYRLSKDDKV PEVAGPFVDV RDVAKAHVIA FEKDEAQGQR IITSNGRFSS QLILNIIREK FPELREKLPV GVPANGKVPE SDSWDDSKSK KLLGFKFSDI EKVVVDTIEQ VIRANE
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