| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_34492 |
|---|
| Symbol | ARG1 |
|---|
| ID | 4851585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 2213310 |
|---|
| End bp | 2214560 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 640393293 |
|---|
| Product | argininosuccinate synthetase |
|---|
| Protein accession | XP_001387008 |
|---|
| Protein GI | 126274941 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0137] Argininosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00032] argininosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.491384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAG GTAAAGTTTG TTTGGCTTAC TCCGGTGGTT TAGATACCTC GGTCATCTTA
GCCTGGTTGT TGGAAGAAGG TTATGAAGTC ATTGCTTTCT TGGCCAACAT CGGTCAGGAA
GAAGACTTTG AAGCTGCTGA AAAGAAGGCT TTGGCCATTG GTGCCACCAA GTTCGTCGTT
GTGGATGTCA GAAAGGAATT CGTCGAATCC GTCTGCTTCC CAGCCATTCA AGCCAATGCA
ATCTACGAAA ATGTATACTT GTTGGGTACT TCCTTGGCTA GACCAGTTAT TGCACAGGCC
CAGATTAAAG TTGCTGAAGA AAACGGTTGT TTCGCTGTCT CCCACGGTTG TACCGGTAAG
GGTAACGATC AGGTCAGATT CGAGTTGTCT TTCTACGCCT TGAAGCCAGA TGTCGTTGTC
ATCGCTCCAT GGAGAGACCC AGCTTTCTTC AACAGATTCG CCGGTAGAAA CGATTTGTTG
GAATACGCTG CCTCCAAGAA CATCCCCGTT GCTCAAACCA AGGCTAAGCC ATGGTCCACC
GATGAAAACT TGGCTCACAT CTCCTTTGAA GCCGGTATCT TGGAAAACCC AGACACCACT
CCTCCAAAGG ACATGTGGAA GTTGACAGTT GACCCAACCG ATGCTCCAGA CACCCCAGAA
GACTTTACTG TTGTCTTTGA AAAGGGATTG CCTGTCAAGT TGATCTTGGA TGGAGGTAAG
AAGGTTATCA CCGAATCTGT TGAATTGTTC CTCGAAGCTA ACGCCTTGGC CAGAAGAAAC
GGTGTCGGTA GAATCGACAT TGTCGAAAAC AGATTCATCG GTATCAAGTC CAGAGGTTGT
TACGAAACCC CAGGATTGAC CATCTTGAGA TCTACCCACA TTGATTTGGA AGGTTTGACT
TTGGACCGTG AAGTCCGTGC TATCAGAGAC CAATTCGTCT CCGTCACCTA TTCCAAGTTG
TTGTACAACG GTATGTACTT CACTCCTGAG TGCGAATATG TCAGATCTAT GATCCCTCCA
TCCCAGATCA CCGTTAACGG TCAAGTCAGA GCCAGAGCCT ACAAGGGTTC TTTGACCATC
TTGGGTAGAT CTTCGGAAAC CGAAAAGTTG TACGACGAAA CTGAATCTTC CATGGATGAA
TTGACCGGTT TCTCTCCAGA AGACACCTCA GGTTTCATTG CCGTCCAATC CATCAGAATC
AAGAAGTATG GTGAAGCAGC CAGAGAGAAG GGCCAAACTT TAAACTTATA A
|
|---|
| Protein sequence | MSKGKVCLAY SGGLDTSVIL AWLLEEGYEV IAFLANIGQE EDFEAAEKKA LAIGATKFVV
VDVRKEFVES VCFPAIQANA IYENVYLLGT SLARPVIAQA QIKVAEENGC FAVSHGCTGK
GNDQVRFELS FYALKPDVVV IAPWRDPAFF NRFAGRNDLL EYAASKNIPV AQTKAKPWST
DENLAHISFE AGILENPDTT PPKDMWKLTV DPTDAPDTPE DFTVVFEKGL PVKLILDGGK
KVITESVELF LEANALARRN GVGRIDIVEN RFIGIKSRGC YETPGLTILR STHIDLEGLT
LDREVRAIRD QFVSVTYSKL LYNGMYFTPE CEYVRSMIPP SQITVNGQVR ARAYKGSLTI
LGRSSETEKL YDETESSMDE LTGFSPEDTS GFIAVQSIRI KKYGEAAREK GQTLNL
|
|---|
| |