| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33568 |
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| Symbol | |
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| ID | 4840608 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 980471 |
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| End bp | 981727 |
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| Gene Length | 1257 bp |
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| Protein Length | 387 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391923 |
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| Product | predicted protein |
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| Protein accession | XP_001386201 |
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| Protein GI | 150866559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0922684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAATA CTGACAAGAG CGCAAAGAGT GAGTCCAAGA AGGAGAAGCG TGAGCGTAAG
CTCGAGAAAA AAACCAAAAA AAGATCTATT GAGGAAGAAG TTGACAAGGT AGCTGCAGAA
GAGAAGAATG AAGAGTCTCA AGAGCCATCT ACCGAAGCTG AAAACACACA AGCCTCTGCT
CCAAAGCATG CCGATTTCGA AGAGTTAGAA ATCGACTTAA GCGCAGGAGT TCCTCTTTCG
AAGAAGCAGC TGCGTTTGTT AAAGAAAGGG AAGTTGGACT TGGAAAGACT TGCTAAGAAG
CATCCAGTTC CCAAACCAGA GCTTACTGAA GAGGAAAAGC TTGCCCAGGA GGAAGAAGAT
AAGAAGAAGT CCAAGAAGTC AGAGTTTGCA GTATGGATCG GAAACTTATC GTTCGATACT
ACTAAAGAGG ACTTGGTTCG TTTTATTGTC GGAAAGACAG CTCACAATGG AGAAGACGAC
TCTCAGTTAA TCAAGATCGA AGAAGCAGAT ATCACCAGAG TGAACTTACC CAAGAAGGAA
AACAAAATCA AGGGATTTGC ATATATTGAT TTGCCCAGTG CCGTACATGT GACCAGTGTA
GTTGCTTTGA GCGAATCTCC TTTGAACGGA AGAAAGTTGT TGATCAAGAA TGCCAACTCG
TTTGAAGGTA GACCAGCTGC TGCTGTTGCT CCCTTGTCGA AAAATCCACC TTCTCGTATT
CTTTTCGTAG GAAATTTGTC GTTTGACACT AGTGAAGATA ACTTGGAAGA ACACTTCCGT
CACTGTGGTG AAATTGTTCG TATAAGAATG GCTACATTTG AAGATACCGG TAAGTGTAAG
GGCTTCGCAT TCATTGACTT TAAAGACGAA ACCGGTCCTA CCGCTGCGTT GAAGTCGAAG
TTGGCCAAGA AGTTGATCAA CAGACCGCTC AGATTAGAAT ATGGTGAAGA CAGATCTAAA
AGAAACCCTA ATCATATCAG AAAGGCAGAA GTTCAAGAAG GAGAAGTTGA CGATTTTGCT
CCTGTCAGAG AAAGACCTGC TGCAAGAGAA AGACCTGCTA GAGAAGCTCC AAATTTCGAG
AATAGTAACT ACGAGAAACC ACAAAGAGCA TCATCAACTC CTAAGAAGAG AGTATTCAGA
GACGATAATC ATAACCACAG CAATAAGAGA GTCAAGTCGT CGGTAGCTTT GGCCACAGCA
CAGAGAGCCA GTGCCGCCAT TGTTCCATCT TCAGGTAAGA AGATCACATT TGACTAG
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| Protein sequence | MGNTDKSAKS ESKKEKRERK LEKKTKKRSI EEEVDKPSTE AENTQASAPK HADFEELEID
LSAGVPLSKK QSRLLKKGKL DLERLAKKHP VPKPELTEEE KLAQEEEDKK KSKKSEFAVW
IGNLSFDTTK EDLVRFIVGK TAHNGEDDSQ LIKIEEADIT RVNLPKKENK IKGFAYIDLP
SAVHVTSVVA LSESPLNGRK LLIKNANSFE GRPAAAVAPL SKNPPSRILF VGNLSFDTSE
DNLEEHFRHC GEIVRIRMAT FEDTGKCKGF AFIDFKDETG PTAALKSKLA KKLINRPLRL
EYGEDRSKRN PNHIRKAEVQ EGEVDDFAPN SNYEKPQRAS STPKKRVFRD DNHNHSNKRV
KSSVALATAQ RASAAIVPSS GKKITFD
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