| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33428 |
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| Symbol | AZR1 |
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| ID | 4840711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 628798 |
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| End bp | 630627 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640392026 |
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| Product | MDR transporter |
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| Protein accession | XP_001386129 |
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| Protein GI | 150866501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.153237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.442314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTAG CTTCTGATGA TAAAGAGTCC ATTTTGCCGA CTTCCAAAGA CTATGGATCT
ACCCCACTAA GCCAAGATAA TAGCGAAGAC CTGGTGGCTG TGAACGAAAA GGGCGACATA
GATACTTCCA ACAAGAAAAA GTACTACGAA TCCAATGCTG GAGATGGTTC CAGAGCTGAA
GATCAACATC TTACAGGCTT GACTTTGGCA GTGACGTTAG TGTCTTGTGT TTCGTGTTTG
TTTCTAGTTG CATTGGACCA GACCATCGTG TCCACAATCT TAACGCAGGT TGGAGATAAG
TTTAAAGAGT TCGAGAAAAT CGGATGGTTA ACATCAGGTT ACCTTTTGCC TATGGCTACA
TTGGCTCCTT CTTATGGTAA GGTGGGGATT GCCTTTGGTA GAAAATATAC CCTTCTTGTG
GCCGTAATAG TGTTTGAGAT CGGCTCCTTG ATCTCAGGAT TGTCAAACTC CATGAGCATG
TTGATTGGTG GAAGAGTTAT CCAAGGTATT GGTGGAGGTT GTGTCCAAGC AATGGTAGTT
GTCATTTTGA CAGAGTCTGT GCCTATTTCC AGACGTCCTT TATCGTATAT GTTACTTGGG
GTCACCTTCT CTCTTTCCTC TGTATTGGGA CCTTTCATTG GTGGAGCTTT CGCTACACAT
GTTTCGTGGA GATGGTGCTT CTACATTAAC ATTCCAATTG GTGGTATGGC TGCAGCCTTG
TTGATTTTCG GCTTCCATCC TCCAAAACCC GAAGGAAATA TTAGACAGAA ATTGGCCAAG
ATTGACTATT CGGGAACCTT CTTGCTCACT GTGGGATTGG TGTTGGTCTT GTTAGGTCTT
ACCTTTGGTG GTATCGATTT CCCTTGGAAG TCTGCTGCCG TTATTTGTTC TTTTGTAATT
GGAGGTTTGT TCCTCATAGC ATTCTGTGTC TGGAACTTCA AGTTTTCGAA GAATCCCATC
ATCATCCCGC AGATCGTGAG GATTCCTCCC CTTATGGCTG CATGCATCTC TGGATCTTTC
AACTTTGGCT TTTTCTTGGC CAACTTTACG TATTTGGCTG TCTATTTCCA AGTCATATTC
GGTGCCACTG CTTGGAAATC TGGTGTGGAT TTGCTTCCCA TGATTATTGC CGTTACCATG
ACTTCAATCT TGAACGGAGT GTTCATCAAG TTCACCAGAT ACGTCAAAAT TACCATGTTG
ATTTCTGGTG TCTTGGGCCC AGTCGGTACA GGGTTGCTTT TGCTCCTCAG AAAAGATTCA
CCATTGGCCG ACAGAATCGG TTTATTGATT CTCTGTGGTA TCTCGATTGG TTTGCAGTTC
CAAAGTTCCA TGTTGGCAAC CCAATTGTGT GCTCCTCCTG ATATCACCGG TTCTTTGATT
TTGAGTACCA TCTTCCTCAA CTTCCTTAAA TCCACTGCAG CAGCCATTTC TGTTTCTTTG
GCTCAACTTA TTTTCCAAGC AAGTGGTACT TCATACATAA AAAGTTTGGT AAACAGTTTA
CCTCGTGATT CCGCTGAGTA TCAAGCATTG TATGGTATTC CACCAAAGGA CCTTATTTCA
ACCCCTAGAA TCATTAACAC ATTGCCTGAA TCGGCCAGGC AAATGGTATT GGACCAGTTC
ATGAGAGCAT TGCACAATGT CTTCTACTTG GGACTAGCAT TTTCGATCGT GGCTCTCATC
GGTGCTGTCT TCACCACAAA CAAGAAGATT CCAAAGGCTT CAGATATTGC CAAGAACAGC
GATGTAGAAA AGGGCAACAA GGATGCTGCT ACCACCGAAG AGTCGGAAAT CATCAGTCAG
ATCGAATCCA CTGCAAAGGA TCAAGAATAA
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| Protein sequence | MSLASDDKES ILPTSKDYGS TPLSQDNSED SVAVNEKGDI DTSNKKKYYE SNAGDGSRAE
DQHLTGLTLA VTLVSCVSCL FLVALDQTIV STILTQVGDK FKEFEKIGWL TSGYLLPMAT
LAPSYGKVGI AFGRKYTLLV AVIVFEIGSL ISGLSNSMSM LIGGRVIQGI GGGCVQAMVV
VILTESVPIS RRPLSYMLLG VTFSLSSVLG PFIGGAFATH VSWRWCFYIN IPIGGMAAAL
LIFGFHPPKP EGNIRQKLAK IDYSGTFLLT VGLVLVLLGL TFGGIDFPWK SAAVICSFVI
GGLFLIAFCV WNFKFSKNPI IIPQIVRIPP LMAACISGSF NFGFFLANFT YLAVYFQVIF
GATAWKSGVD LLPMIIAVTM TSILNGVFIK FTRYVKITML ISGVLGPVGT GLLLLLRKDS
PLADRIGLLI LCGISIGLQF QSSMLATQLC APPDITGSLI LSTIFLNFLK STAAAISVSL
AQLIFQASGT SYIKSLVNSL PRDSAEYQAL YGIPPKDLIS TPRIINTLPE SARQMVLDQF
MRALHNVFYL GLAFSIVALI GAVFTTNKKI PKASDIAKNS DVEKGNKDAA TTEESEIISQ
IESTAKDQE
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