| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32564 |
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| Symbol | |
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| ID | 4839874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 105795 |
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| End bp | 107873 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640391189 |
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| Product | predicted protein |
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| Protein accession | XP_001385352 |
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| Protein GI | 150865935 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCTG ATATCATAGA CTACACTTCT CCATCCATAT CCGATCTTCC TCCGGAAATC
ATCTCCTACA TCTTCTCGTA TCTCTCACCT GACTTGGTAT ACGAAAAGTT TATCGAATTA
TGTCCCTGGA CCAACCATAG TATCCAAAAC ATCGCCTACG CTTCTATTTT TACTCGTAAG
CTCATTGTAC GACTGGTGCC GCTCAGGAAA ACTGGATATG ACGCTTCCCG AGTCTTTTAC
TCCCCCGCAG ATCTCCAGAC TGCCTTTGTC ATAATTGGAT TCCAAAGAGC TTACAATGTG
CTTCGTAACT TGATCCACTA CAACCTAATG AATAATACGC TGATTTTTCC CCGTGAAATG
GGATTTCTTT TTCGGTTCAA GAATGAAGCT GGGAATGTGT CTGAAATGCC GTCTCAATGG
CTCCATAGCG AAGTAGACTA CTTTGCTAAA CTTATTGAGA TTCTTTCATT AGACAATTAC
TATAAGGATG CCATTCCTCG AGTCTGTTTC CAACTATCGT ATAACATCAC ATTGAGCCCA
GCATTAATAG CCAAAAGCAA CAAGATTATG CAGAGAATAG AATCATTAGA AAATAAGACG
GTTAAAGTGT TGATACAGAG TAGCTACACA TCCAAGAATT CAGTTCAAAA TATCCGTCTA
TTACACACAA ATTCGTTGGA CAGCTTAGAG GAACTCTACC TATGGAGATA TAACATTTCC
AACTACCATG TTAAAAACTA CCTACGCAGA AGTTCAGAGA CTCTTCGAGT TTTGGACTTG
ACAGCAAATG AGATAACTTC GCTTCAAGGT CTAACACTAC CTCCTAACCT TGAGAAGCTA
CTTCTCAGTG CCAACAACAT TACGAGCTTG GATGGTCCGA ACTATGACGA AGCTACCAAG
TTAAAGATTT TGGATGCCTC AATCAATGCC ATTCATGACT TGGACTATAA TTTAGTGCTT
CCTTCATCTC TCACAAGTCT CAAGATCACT TACAATTCAA TTCCTCAGAT ACACCAAGCA
CAGATTCCGC AAAATTTGAA CATATTGGGA CTCTCTAAAA ACTCATTGAC TCATTTGGAA
GATATCATTC TTCCACCTTC TCTCTGCGAA TTGCATTTGA ATGGTAATTC TATAAAGACT
TTGCCAGAAA ATTTATTTAT TTCTACTCCC AATTTGACCA TTTTGGACTT GTCAGAAAAC
CAAATCGACG ACTTGGACGA TCTTGGTGAA TTGCCAGATA GTCTAAGTGA ACTAATGCTA
GACAACAACG AGATTGACCA TAGTGATTTG CATAATATAC TAACAACCAA CTTGACCAAA
TTATCATTGC GATCTACAGG ATTAATTACA TTTAGTCATG TTCAATTGCC AAAGGGGTTG
AAAGAGCTCG ACATTTCCAA AAATGAAATC GGAGAAATCG AGTTGGTTAA TTTTGGTGAC
GAGTTGACAA AGTTGAATTT AAGCAACAAC ATCCTATCCA CATTCAATTT GGATACATCA
GTACACTTAC CGCGTACTAT ACGGAAGCTT GATTTGAGCC GTAACAAGTT CATGCGTGGA
TTGGATAGCA TAGGGATACC GTCCCATTTA ACTTCTTTAC ACCTTAATGA TATAGGTCTT
GGATTATTAA CCAACGATAC TATCAGTAAA TTACCCGTGT CATTAGAGAC GTTGTTCCTC
GATAATACAT GCTGGACTCC AAAAGTGAAT AGCAGTGGAA CTATAACCAA ATACAAATCA
ATTGAGCTCA GTCTTGACTT CAGACTGATA TTGCCCAATT TGACAACGTT ATCGTTAGAA
AGAAATTGCA TTGGCCTGAT CGATGACATC ACCTATCCTT GTGGTTTGCA ATGGCTTTCT
TATCAACATA ACGACTTGGG ACATATAAAT TTTCAGAATA TCCCCACCAA CATTAAATGT
CTACAGTTAA ACAACAACAA GATCCACGAA GAAATTCTTT GGGAATCGAT TCGTAATGTG
CCCTACTTTC CCGAGATCGA ATACTTCGGC ATTTGTGGTG ACCAGACGGA ACTCATGCGA
CTGGGTATCT ACTTTGGGGG AATGGAGCCT ACGAGTTGA
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| Protein sequence | MESDIIDYTS PSISDLPPEI ISYIFSYLSP DLVYEKFIEL CPWTNHSIQN IAYASIFTRK
LIVRSVPLRK TGYDASRVFY SPADLQTAFV IIGFQRAYNV LRNLIHYNLM NNTSIFPREM
GFLFRFKNEA GNVSEMPSQW LHSEVDYFAK LIEILSLDNY YKDAIPRVCF QLSYNITLSP
ALIAKSNKIM QRIESLENKT VKVLIQSSYT SKNSVQNIRL LHTNSLDSLE ELYLWRYNIS
NYHVKNYLRR SSETLRVLDL TANEITSLQG LTLPPNLEKL LLSANNITSL DGPNYDEATK
LKILDASINA IHDLDYNLVL PSSLTSLKIT YNSIPQIHQA QIPQNLNILG LSKNSLTHLE
DIILPPSLCE LHLNGNSIKT LPENLFISTP NLTILDLSEN QIDDLDDLGE LPDSLSELML
DNNEIDHSDL HNILTTNLTK LSLRSTGLIT FSHVQLPKGL KELDISKNEI GEIELVNFGD
ELTKLNLSNN ILSTFNLDTS VHLPRTIRKL DLSRNKFMRG LDSIGIPSHL TSLHLNDIGL
GLLTNDTISK LPVSLETLFL DNTCWTPKVN SSGTITKYKS IELSLDFRSI LPNLTTLSLE
RNCIGSIDDI TYPCGLQWLS YQHNDLGHIN FQNIPTNIKC LQLNNNKIHE EILWESIRNV
PYFPEIEYFG ICGDQTELMR SGIYFGGMEP TS
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