| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32530 |
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| Symbol | YIC1 |
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| ID | 4840087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 28472 |
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| End bp | 30943 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640391402 |
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| Product | Alpha-glucosidase II; Alpha-xylosidase |
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| Protein accession | XP_001385692 |
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| Protein GI | 150866186 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.725216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC ATCAAAACAT GGAATATTAT TCGTTGGATC GTCTGATCGA TTCAGACACA
CGGTTCACCC GCGGGATGTG GGAATTGAAA CATGGTATTA ATCTCCGTTG GGCATTAGAA
AATGTCAAAA CTGTAGTTAA AGATCCCAGT TCCATTCAGA CTGTATCTGC AACTCAAAGA
ATTTCTCAAA GAGGTGATAC TTTGAATAAT CCAACTATTA CTTCTACTAT ATCTTCACCT
TCGGAAGGTA TTGTGAAGTT TGAAGCTTAT CATCACCTAT CTGGGTATAA CAACCACAGC
GAACCTCGGT TTGGTTTGAA CGAAAAAGAT AGTCCTGATG TTACAACTTC AGTTTCTGAT
GACTTCTCGA GTTTGGAAAC GGAGGGTGAT ATTTCGGTGA ATGTCTCTAA CAAGCCAGCG
ACGTTTGAGT TTTTGGGTAC AAAAGGTAAA CTATTAACAA AGTTAGGGTA CAAGTCATTG
GGATGGGTTA AGGACGCTCG TGTTCCTCAC AGCTCCACTC CAAGAGGCTA TACTACATAT
ACTACTGCCC AATTACATCT TTCTGTTGGT GAAAGATTAT TTGGATTGGG AGAGAGGTTT
GGTCCTTTTG TTAAGAACGG TCAAAGAGTT GAAATTTGGA ATGAAGACGG AGGTACTCTG
AGTGAATGGA CATACAAGAA TATTCCATTT TATCTTTCTG ACAGAGGGTA TGGTATCTTT
GTTGATTCTT CCTCAAACGT TGTTTTCGAG TTACAATCTG AAAGAACAAC CAGGGTTAAT
ATTACTGTGC CAGGAGAAGG CATTAGATTT TATGTAATTC ATGGTCCTGA TCCAAAAACT
ATTTTGAAGA GATATACGAA GCTTACTGGC AGACCAGCTT TACCACCAGC TTGGACTTTT
GGTCTTTGGT TAACTACTTC ATTCACAACT GAATATGACT TGAACACTGT GAGTTCATTT
ATTCAAGGAA TGAAGGATAG AGATATTCCC TTGACCACCT TCCATTTTGA CTGCTTTTGG
ATGAAAGGTT TCCAATGGTG TGATTTTGAG TTTGATCCTC AATACTTTCC AGATGCCAAG
TTGATGTTGA AGGAACTCAA GTCAAGATTC AACGTCAAGG TTTGTGTTTG GATAAATCCA
TACATTGCAC AAGAGTCAAT GTTGTTTAGG GAGGCAGATG AAAAGAGGTA TCTTATTAGG
TATAACTCAA ATGTGAACAA TGGAGCTTCT TATCAGACAG ATTTGTGGCA AGCAGGTATG
GGTATTGTTG ATTTTACTAA TCCTGATGCT GTCAAATGGT ACCAATCCAA ACTTGAACAT
TTAATCGATC TAGGAGTAGA TTCATTCAAG ACGGATTTTG GTGAAAGAAT TCCTGTAAAG
GATATCGTCT ACCACAGTGG TGAAGATTCT GTGGCAATGC ACAATTATTA TGCATTGCTT
TACAACAAGA CTGTTTTTGA ACTTTTGGAA AGGAAGCTAG GAAAAGATAA TGCTTGCGTC
TTCGCTCGTA GTGCGACAGT TGGTGGTCAA CAATATCCAG TTCATTGGGG TGGAGACTGT
GAGTCCACCT TTGAAGCAAT GGCTGAATCA TTGAGAGGTG GATTAAGTCT TACATTATCA
GGTTTTGGAT TTTGGAGCCA TGACATAGGT GGCTTTGAAG GTGATCCACG CCCTGAAGTT
TATAAGAGAT GGTGTGCATT TGGCTTGCTT AGTTCTCATT CTCGTCTACA TGGAAGTAAC
TCTTACAGAG TTCCATGGAA TTTTGATGAT GAAGCATCGG AAGTTTTGGC AAAATTCACC
AAATTGAAGA TTTCATTGAT GCCCTACATC TACAAACATG CTATTGAATC ACATGAGACT
GGAGTTCCAG TAATGAGAGC AATGATGTTA GAATTCCCTG ATGACAAGAC TGCTGTAAGT
GTCGATTCTC AATTTACTTT AGGAGATTCT TTGTTGGTTT CTCCTGTATT TTCTGGAGAT
GAAGGTGAGG TTTCTTACTA CTTACCTAAG GGCTCTTGGT ATGGTCTTTT GGATGGCAAA
ATTAGATCAT CTGTGGGCGA GTGGATGAAT GAAGTTCATG GTTATACGTC TTTGCCCATT
TTAGTTCGTC CAAACTCGGT GATTGTCACG TCTGGTCCTG ATGCTGAAAA TGAACACCCT
GTGTACACTT GGAATGAAAG ATTTATGCTC AACGTATTTG ATGTTGACAA AACGTGGAAT
AATTCAACTA ATATTCCAAA TAGTAAGAAG CTTGGAAAGA TTGATACCAC TATTGATGTT
TCTAAAGGAG ATAATTTGTT AACAATCAAG GTAAGTGGAG ATTTCAAGAC ACCTTATTTT
GTAAGCTTCT TAGGCAAGAA TGCTGGTGTG GAAGTTGTGA AGGGTAAATC CAAACCATCA
GGAAGCGGCA CTATTGGAAA TCTTATTTTT GAGTGCAACA GTGGTGTTTT GCAATTCAAA
ATTTTAAACT AA
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| Protein sequence | MSNHQNMEYY SLDRSIDSDT RFTRGMWELK HGINLRWALE NVKTVVKDPS SIQTVSATQR
ISQRGDTLNN PTITSTISSP SEGIVKFEAY HHLSGYNNHS EPRFGLNEKD SPDVTTSVSD
DFSSLETEGD ISVNVSNKPA TFEFLGTKGK LLTKLGYKSL GWVKDARVPH SSTPRGYTTY
TTAQLHLSVG ERLFGLGERF GPFVKNGQRV EIWNEDGGTS SEWTYKNIPF YLSDRGYGIF
VDSSSNVVFE LQSERTTRVN ITVPGEGIRF YVIHGPDPKT ILKRYTKLTG RPALPPAWTF
GLWLTTSFTT EYDLNTVSSF IQGMKDRDIP LTTFHFDCFW MKGFQWCDFE FDPQYFPDAK
LMLKELKSRF NVKVCVWINP YIAQESMLFR EADEKRYLIR YNSNVNNGAS YQTDLWQAGM
GIVDFTNPDA VKWYQSKLEH LIDLGVDSFK TDFGERIPVK DIVYHSGEDS VAMHNYYALL
YNKTVFELLE RKLGKDNACV FARSATVGGQ QYPVHWGGDC ESTFEAMAES LRGGLSLTLS
GFGFWSHDIG GFEGDPRPEV YKRWCAFGLL SSHSRLHGSN SYRVPWNFDD EASEVLAKFT
KLKISLMPYI YKHAIESHET GVPVMRAMML EFPDDKTAVS VDSQFTLGDS LLVSPVFSGD
EGEVSYYLPK GSWYGLLDGK IRSSVGEWMN EVHGYTSLPI LVRPNSVIVT SGPDAENEHP
VYTWNERFML NVFDVDKTWN NSTNIPNSKK LGKIDTTIDV SKGDNLLTIK VSGDFKTPYF
VSFLGKNAGV EVVKGKSKPS GSGTIGNLIF ECNSGVLQFK ILN
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