Gene PICST_32156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32156 
Symbol 
ID4839422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp819684 
End bp820166 
Gene Length483 bp 
Protein Length160 aa 
Translation table12 
GC content47% 
IMG OID640390737 
Productpredicted protein 
Protein accessionXP_001384824 
Protein GI150865557 
COG category[S] Function unknown 
COG ID[COG4891] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0990853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.265133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACTA TTACAGCGGA GATTATCATC AATGGCAAAC CTGAGAAAGT GCGGGAGCAT 
TTCCTCAAAC TCGAGAACCA CAGCAACTGG AACCCGTTTT TCACCAAAGT TTCGATGTAT
AAGAAGAAGG ATGCTACTGC AACTGAGGTA CAACCCGGAG ATCGGCTCGA AATAGAAATG
AAGCCAGAGG GTTGGTCCTC GCTGACTATG ATGTACCCCC GTGTTTTAGC CAATACAGTA
ACGGAGTTTG TATGGAAGGG CGATTTGATC TTTTCCTGGA TCTTCAGCGG TACACACAGT
TTTGTGTTCA TGCCCCAGGC CAACGACGAA GGCAAGATAG CGTACACCAG ATTGGTTCAG
TCAGAGACTT TTTCCGGAGT GTTGGTGCCA CTTTTAACGT GGATGGGACT ATTCAGTCTG
ACTGAGAAGA GCTTTCATGC TCTCAACGAA GCATTGAAGG AGCAGGTGGA ACAGCTCGAA
TAA
 
Protein sequence
MPTITAEIII NGKPEKVREH FLKLENHSNW NPFFTKVSMY KKKDATATEV QPGDRLEIEM 
KPEGWSSSTM MYPRVLANTV TEFVWKGDLI FSWIFSGTHS FVFMPQANDE GKIAYTRLVQ
SETFSGVLVP LLTWMGLFSS TEKSFHALNE ALKEQVEQLE