Gene PICST_31237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31237 
Symbol 
ID4839019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp294269 
End bp294697 
Gene Length429 bp 
Protein Length142 aa 
Translation table12 
GC content48% 
IMG OID640390334 
Productpredicted protein 
Protein accessionXP_001384353 
Protein GI126135658 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.652624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAT ACAGATTTTC AACGGCCCCC ACATACACGG AAGAACAGCA GCAGCTTGTT 
CTACGTATCC TAGGGTATGA CTCTATGGAG TACTACCAGA TGCTTGGGGT TGACCGCTAC
AGTACAGCCG ACGATATTTC CAGTTGTTAT CGCAGGTTAG CAGCCCAGGT TCATCCAGAC
AGAAATTCGC ACCCACAGGC TACTGATGCC TTCAAGCAAC TCAACGAAGC GTGGGAAGTA
CTTCGTGAAC CCAGCTCAAG AACGATATAC AACTCTCAGC TAGAGCACGA CTTTTCAGAG
GATTCCATGA ACAGCAGCTT TTCGATCGAT ACATCTATTG GATCTGAGTC TGACTTAGGG
AAGAAACCAA GCGATGACAT TGGAAGTATG TTCTGGAAGT TGGTGCTAAT GGGGCTAGTA
GACCGGTGA
 
Protein sequence
MAKYRFSTAP TYTEEQQQLV LRILGYDSME YYQMLGVDRY STADDISSCY RRLAAQVHPD 
RNSHPQATDA FKQLNEAWEV LREPSSRTIY NSQLEHDFSE DSMNSSFSID TSIGSESDLG
KKPSDDIGSM FWKLVLMGLV DR