Gene PICST_28415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_28415 
Symbol 
ID4851191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1155413 
End bp1157446 
Gene Length2034 bp 
Protein Length677 aa 
Translation table 
GC content40% 
IMG OID640392899 
Producthypothetical protein 
Protein accessionXP_001387453 
Protein GI126274177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.460739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.102552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC TAAACATCGA TTTGCATTCT TTACCAGATC ATTGTGTGCA ATTTATACTA 
GACCTCTTAT CATTCCGTGT ACTCCAGAGC TTAGCTTCGA ATGGCACTTC GCCATTTCAA
ACTAAAATAT TGAGGTCAAT CTACAAAGTA GTAGACATAG GCTACGGGTA CAACCGTAAA
CTTGACTTGG AATACCTAAA GCTGCATGAA CTCTTCGGCT CGAGAAACGA AATATCAGCG
CAGCTTAAGT CATGTCAAGC ATTCCAACAA CTTCTAGACC TGAATCGCCA AATTCGTGTT
CAGGAGGTGC GTATAATGTC CGTGCCAGCT CCTAGATTCA TTCCCAACCT TCATGAATTG
GATTCAGTGG AAAGGATTTT CGTCAACTTG GCTAACTTGG ATAACTTCAG AAAGGGAGAG
AGAAACGCCT TGAGATACCT TCCTGACAAC GTGTATATGG TGGTAACAGA TTATTATCCA
GAAATGCTAT TTCCACAAAA CCTTAGGAAA CTTGAATTGT CGTTATGGGA CGCGATGACT
GTCGAAAACC TACCACCTAG GTTACAGTTT TTGTCTATTG CACAACGTAG CGGAGAACCA
CTGATGTCTT TACAACAACT TGGACGTTTA CCTCAGACGC TCAAACATCT CATACTTCTA
AACTGCATTG ATATGAGCCA TGAAGATGGC GAATGCAAGT TAGACTTGCC TCTTTCATTG
TGCGCCCTTA AGATCTCAAC TGGTTATTCC GGCAATGCTT GTCTAGACAT TTCCCATTTG
AAAAACTTGC AAAGATTCAG TGTTTATTTA CCTGTCTTGC CATTGTCCTT CTTCAAATTG
CCACCTCTGA TTTTGAAACT ATGCTATGAA TCCGAAAGGG GGTTGTCTTG TTCGGAACAG
ATCAGTAAGC TTAGTCTTTT GAATAATGTT CAGCTCCAGC TTGGTAATGT TAAATCAAAA
ATACGCTTTT CAAATAGTGT CAACAATGTG TGTCTAAAGT CAGGTCGCTT CGGTTCCAAG
CCTGTAGGGG ATTGTATAGA GCTTCCAGAA CAATTGAAAT TCCTTGAGTT CCAGAATTGT
TCAGGCTTAC GACTTACCAG TAATCACGCA TACATGACCT CTTTGACTAT ATTTTCCTGT
AAAGTAATAT CATTACCAGT GATAGATAGT TTGAAAACCT TGAAAATTAT TAATCTTAGA
AACCAAATTA AGTTTTGGGA TACCATAGAT AAGTACTTTC CAGAGTTGTT GTGGTTGGAG
GTCGAGAATT CTCAATTAGA ATCAGTTCCG CTGATACCAT GCCAACTAGA GACTCTTATA
TTAGACCACA ACCTAATTCA GGAGTTCCAC CTCCGTGTAC CACCTAGTCT AACCAGTATA
TCCATGGTTA GCAATATCTT GAAGACATTC ATAGTTTCTG GTCCCAGCAA CTTGAAAAAG
ATAGATATTC AAATGAACCG GTTTCTGGAA TTGTCGCATT CACGCCTACA GCTCCCTTCC
AGTCTTTGTG AATTGGACAT GAGTGCTTGC AAGATATTTT CAGTGAGTGA AGGGTTTACC
TTTCCAGACA ACATTTGTGT CCTCTCGCTA CGAAATAACA GTATTCTTAA TTTGGACAGT
ATCTTGTCGA AATTGCCACT CCGCATAGTT TATCTAGACG TCAGTACACA ATTTAGAATT
TTCAATCCAA GAAAAAACGA AAAGAGAACC ACTGTGAAGA GCAAGACACT TTGGAATGTG
GATCTAGATG GTGCCCTCCT TGGGCTCTCC ATCAACTGGG CGGATTGTCC CAACTTACAA
TACATTAGTA TGAGTGAAAA CTACTTGGGA GACATCGACT TGAAGGATTT TCCGCTGTCT
CTCAAGGGCA TCAAGCTTTC CTATACTACA ATTAATAAAC TCGAAGGTGA CTTTGAGAAC
TTGACCAATT TGATTGAAGT TGACTTGACC AATTGCGAGG GGCACCTAGG CAAAGATATC
GAAAACAACA CTAAGAAGTT TGGCCCCATG GTGTTGGTAA GTCCTACGCG TTAG
 
Protein sequence
MTELNIDLHS LPDHCVQFIL DLLSFRVLQS LASNGTSPFQ TKILRSIYKV VDIGYGYNRK 
LDLEYLKLHE LFGSRNEISA QLKSCQAFQQ LLDLNRQIRV QEVRIMSVPA PRFIPNLHEL
DSVERIFVNL ANLDNFRKGE RNALRYLPDN VYMVVTDYYP EMLFPQNLRK LELSLWDAMT
VENLPPRLQF LSIAQRSGEP LMSLQQLGRL PQTLKHLILL NCIDMSHEDG ECKLDLPLSL
CALKISTGYS GNACLDISHL KNLQRFSVYL PVLPLSFFKL PPLILKLCYE SERGLSCSEQ
ISKLSLLNNV QLQLGNVKSK IRFSNSVNNV CLKSGRFGSK PVGDCIELPE QLKFLEFQNC
SGLRLTSNHA YMTSLTIFSC KVISLPVIDS LKTLKIINLR NQIKFWDTID KYFPELLWLE
VENSQLESVP LIPCQLETLI LDHNLIQEFH LRVPPSLTSI SMVSNILKTF IVSGPSNLKK
IDIQMNRFLE LSHSRLQLPS SLCELDMSAC KIFSVSEGFT FPDNICVLSL RNNSILNLDS
ILSKLPLRIV YLDVSTQFRI FNPRKNEKRT TVKSKTLWNV DLDGALLGLS INWADCPNLQ
YISMSENYLG DIDLKDFPLS LKGIKLSYTT INKLEGDFEN LTNLIEVDLT NCEGHLGKDI
ENNTKKFGPM VLVSPTR