Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28415 |
Symbol | |
ID | 4851191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 1155413 |
End bp | 1157446 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | |
GC content | 40% |
IMG OID | 640392899 |
Product | hypothetical protein |
Protein accession | XP_001387453 |
Protein GI | 126274177 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.460739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.102552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC TAAACATCGA TTTGCATTCT TTACCAGATC ATTGTGTGCA ATTTATACTA GACCTCTTAT CATTCCGTGT ACTCCAGAGC TTAGCTTCGA ATGGCACTTC GCCATTTCAA ACTAAAATAT TGAGGTCAAT CTACAAAGTA GTAGACATAG GCTACGGGTA CAACCGTAAA CTTGACTTGG AATACCTAAA GCTGCATGAA CTCTTCGGCT CGAGAAACGA AATATCAGCG CAGCTTAAGT CATGTCAAGC ATTCCAACAA CTTCTAGACC TGAATCGCCA AATTCGTGTT CAGGAGGTGC GTATAATGTC CGTGCCAGCT CCTAGATTCA TTCCCAACCT TCATGAATTG GATTCAGTGG AAAGGATTTT CGTCAACTTG GCTAACTTGG ATAACTTCAG AAAGGGAGAG AGAAACGCCT TGAGATACCT TCCTGACAAC GTGTATATGG TGGTAACAGA TTATTATCCA GAAATGCTAT TTCCACAAAA CCTTAGGAAA CTTGAATTGT CGTTATGGGA CGCGATGACT GTCGAAAACC TACCACCTAG GTTACAGTTT TTGTCTATTG CACAACGTAG CGGAGAACCA CTGATGTCTT TACAACAACT TGGACGTTTA CCTCAGACGC TCAAACATCT CATACTTCTA AACTGCATTG ATATGAGCCA TGAAGATGGC GAATGCAAGT TAGACTTGCC TCTTTCATTG TGCGCCCTTA AGATCTCAAC TGGTTATTCC GGCAATGCTT GTCTAGACAT TTCCCATTTG AAAAACTTGC AAAGATTCAG TGTTTATTTA CCTGTCTTGC CATTGTCCTT CTTCAAATTG CCACCTCTGA TTTTGAAACT ATGCTATGAA TCCGAAAGGG GGTTGTCTTG TTCGGAACAG ATCAGTAAGC TTAGTCTTTT GAATAATGTT CAGCTCCAGC TTGGTAATGT TAAATCAAAA ATACGCTTTT CAAATAGTGT CAACAATGTG TGTCTAAAGT CAGGTCGCTT CGGTTCCAAG CCTGTAGGGG ATTGTATAGA GCTTCCAGAA CAATTGAAAT TCCTTGAGTT CCAGAATTGT TCAGGCTTAC GACTTACCAG TAATCACGCA TACATGACCT CTTTGACTAT ATTTTCCTGT AAAGTAATAT CATTACCAGT GATAGATAGT TTGAAAACCT TGAAAATTAT TAATCTTAGA AACCAAATTA AGTTTTGGGA TACCATAGAT AAGTACTTTC CAGAGTTGTT GTGGTTGGAG GTCGAGAATT CTCAATTAGA ATCAGTTCCG CTGATACCAT GCCAACTAGA GACTCTTATA TTAGACCACA ACCTAATTCA GGAGTTCCAC CTCCGTGTAC CACCTAGTCT AACCAGTATA TCCATGGTTA GCAATATCTT GAAGACATTC ATAGTTTCTG GTCCCAGCAA CTTGAAAAAG ATAGATATTC AAATGAACCG GTTTCTGGAA TTGTCGCATT CACGCCTACA GCTCCCTTCC AGTCTTTGTG AATTGGACAT GAGTGCTTGC AAGATATTTT CAGTGAGTGA AGGGTTTACC TTTCCAGACA ACATTTGTGT CCTCTCGCTA CGAAATAACA GTATTCTTAA TTTGGACAGT ATCTTGTCGA AATTGCCACT CCGCATAGTT TATCTAGACG TCAGTACACA ATTTAGAATT TTCAATCCAA GAAAAAACGA AAAGAGAACC ACTGTGAAGA GCAAGACACT TTGGAATGTG GATCTAGATG GTGCCCTCCT TGGGCTCTCC ATCAACTGGG CGGATTGTCC CAACTTACAA TACATTAGTA TGAGTGAAAA CTACTTGGGA GACATCGACT TGAAGGATTT TCCGCTGTCT CTCAAGGGCA TCAAGCTTTC CTATACTACA ATTAATAAAC TCGAAGGTGA CTTTGAGAAC TTGACCAATT TGATTGAAGT TGACTTGACC AATTGCGAGG GGCACCTAGG CAAAGATATC GAAAACAACA CTAAGAAGTT TGGCCCCATG GTGTTGGTAA GTCCTACGCG TTAG
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Protein sequence | MTELNIDLHS LPDHCVQFIL DLLSFRVLQS LASNGTSPFQ TKILRSIYKV VDIGYGYNRK LDLEYLKLHE LFGSRNEISA QLKSCQAFQQ LLDLNRQIRV QEVRIMSVPA PRFIPNLHEL DSVERIFVNL ANLDNFRKGE RNALRYLPDN VYMVVTDYYP EMLFPQNLRK LELSLWDAMT VENLPPRLQF LSIAQRSGEP LMSLQQLGRL PQTLKHLILL NCIDMSHEDG ECKLDLPLSL CALKISTGYS GNACLDISHL KNLQRFSVYL PVLPLSFFKL PPLILKLCYE SERGLSCSEQ ISKLSLLNNV QLQLGNVKSK IRFSNSVNNV CLKSGRFGSK PVGDCIELPE QLKFLEFQNC SGLRLTSNHA YMTSLTIFSC KVISLPVIDS LKTLKIINLR NQIKFWDTID KYFPELLWLE VENSQLESVP LIPCQLETLI LDHNLIQEFH LRVPPSLTSI SMVSNILKTF IVSGPSNLKK IDIQMNRFLE LSHSRLQLPS SLCELDMSAC KIFSVSEGFT FPDNICVLSL RNNSILNLDS ILSKLPLRIV YLDVSTQFRI FNPRKNEKRT TVKSKTLWNV DLDGALLGLS INWADCPNLQ YISMSENYLG DIDLKDFPLS LKGIKLSYTT INKLEGDFEN LTNLIEVDLT NCEGHLGKDI ENNTKKFGPM VLVSPTR
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