Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28358 |
Symbol | PRN1 |
ID | 4851135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1021727 |
End bp | 1022746 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | |
GC content | 44% |
IMG OID | 640392843 |
Product | RNA pol II transcription cofactor |
Protein accession | XP_001387838 |
Protein GI | 126274121 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.155514 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCA CCACTGCTAG AACTGTCAAG CAAATTGTCA ACGCCGTTCA GAGACCTGAA GGTGTTGGAG CTACAGTTAG AAGATCCATC GGTATTATGG GATCGAGAAA CTTCAACCCT TTCTTGATGT TCGACCATTT TTCGAGCGCT GGTACCAATG GTTTCCCCGA ACATCCTCAC AAGGGTCAAG AAACTATCAC CTTAATTTTG AAAGGCGCTA TGGCCCATGA AGACTTTACC GGCTCCAAGG GTATCCTTTA CGGAGGAGAC TTACAATTTA TGACTGCTGG TAAGGGTGTC GTTCACTCTG AAATGCCTGT TCCAAACGAA GACGGTTCCC CTACTGTAGG CTTGCAATTG TGGGTTGATT TGCCAGAAAG CTTGAAAGAT GCAAAGCCTC GTTACAGAGA TTTGAGATCT TGGGAAATTC CTGAAGTTGT TGAACAAGAC GGCAAATTGA GAATAAAGGT TATTTCTGGT AAGAGTTACG GTGTAGAATC GGTCAAGGAC TTGGCCTACA CCCCTGTTCA TTACTACTAC TACAGAATGA AGGCAGGTGC CACTTTCAAG CAAGAGCTTC CTAAGGACTT CAACTTCTTC TTGTACGTAT TGAGCGGTAA CGACTTGGTT CTTAACGGCG ATACCAAGGT TAAGGAATTC AACAACGTAT TCTTAAACAG CGATGGTGAC TTTATCACTG GTGAAAACGT ATCCAAGTCA ACTAATGAAG ACGAAGAAGT TGAGTTCGTC TTAATTGGTG GCCAGCAATT GGACCAAAAA GTAGTGCAAT ATGGCCCATT TGTGTCCACA ACCAAGGAAG GTATCGAAAA AGCCTTTGTC GACTACAACT ACGCCCGAAA CGGCTTTGAA AACGTCAAGA CCTGGAGGAC TTTGATCAGT AACGGTGTGA CCAAGGAAAT GATAGAAGGT CCATTGAACG GTAACCTTGA AAAGAGAGAA CAGGCAAGAT TAGCGTACTT AGCCAAGCAA AAGACGACTC CTGAAAAGGA CGAACTTTAG
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Protein sequence | MSSTTARTVK QIVNAVQRPE GVGATVRRSI GIMGSRNFNP FLMFDHFSSA GTNGFPEHPH KGQETITLIL KGAMAHEDFT GSKGILYGGD LQFMTAGKGV VHSEMPVPNE DGSPTVGLQL WVDLPESLKD AKPRYRDLRS WEIPEVVEQD GKLRIKVISG KSYGVESVKD LAYTPVHYYY YRMKAGATFK QELPKDFNFF LYVLSGNDLV LNGDTKVKEF NNVFLNSDGD FITGENVSKS TNEDEEVEFV LIGGQQLDQK VVQYGPFVST TKEGIEKAFV DYNYARNGFE NVKTWRTLIS NGVTKEMIEG PLNGNLEKRE QARLAYLAKQ KTTPEKDEL
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