Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_28162 |
Symbol | TUB4 |
ID | 4850941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 504149 |
End bp | 505276 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | |
GC content | 43% |
IMG OID | 640392649 |
Product | Gamma tubulin |
Protein accession | XP_001387736 |
Protein GI | 126273902 |
COG category | [Z] Cytoskeleton |
COG ID | [COG5023] Tubulin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0897404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATAATC CTCGTAATAT TCATCTCAGC GAACAGGGCA GTGGAGCTGG AAATAACTGG AAACACGGGT ATGAGTATGG CCAGGAAAAG GAAGAAGAAT TGCTTAATTT GATCGACAGA GAAGTGGACA AATGTGACAA TCTTGCCAAT TTCCAGCTCT TCCATAGTGT AGCGGGAGGA ACTGGATCAG GTGTAGGATC TTTGCTTCTT GAAAAGTTGA GTGACAGATA CGGCAGCAAG AAGCTTATCA ACACTTTTCT GATTTTTCCC TCCAACGAAA AGACGTCGGA CGTTGTTGTT CAGCCATATA ACACAGTTTT GACTTTACAC AGACTAATCG AGTACAGTGA TGCTACGTTT GTGTACCACA ACGACGCCTT GAATTCGATC CAGAACTTGC TCTTCAATAC TCATGGAAAC CACGGCGATG GCTATGATGG CGCAAATAAG TTGATTGCCT ATGTTCTGGC CAGCATATCA AATCCTTTGC GGTTTCCTGG GTACATGTAT AGTTCTATTG AATCCATACT TTCTACGTTG GTACCTACGC CAGACTTGAA GTTCTTGACG ACATCGATTT CTCCATTCGC ATCCCAGACG AACAAGCATG TGTATTCAAA CGAATACGAC ACTATCTTAG AGCTTCTCAA CGACAGATAC AAGATGAACA GAGTAGACCA GCCTGTGCAG TACACATCAA TGCTTAACTA TTTGATAGGC AACAACCTAG ACCATCTGGA AATCAGAAAG GGTACAATCA AAGCCCAGCT GAGAGTCGAC TTTGTGCCCT GGGCTCCTAC CTCTATACAA TTGGTACATG GCAAGAAATC GCCATTCCTA CAGGCTAAAG AAAATGGACA AAAGAATATC AGTGGAGTAC AAGTCTCGAA CAATACGTCC ATAGTGCTGG TATTCACCAA GATATTGAAG CAGTACGATC TTTTGGCCAA GCGAGAAGCA TACGTCAACT CCTACACTGG GTCCAAGGAT CGACTGGAGA TTGCCAAAGT AATGGAGATG TTCAACGAAT GTCGAGAAAG TGTTGCTAGT GTTATCGAAG AGTACCGAGC ATGTCAGAAT GTAAACTACT TAGAGGATGA GATTCTTGGA GACGATCAGG TGATGTAG
|
Protein sequence | MYNPRNIHLS EQGSGAGNNW KHGYEYGQEK EEELLNLIDR EVDKCDNLAN FQLFHSVAGG TGSGVGSLLL EKLSDRYGSK KLINTFLIFP SNEKTSDVVV QPYNTVLTLH RLIEYSDATF VYHNDALNSI QNLLFNTHGN HGDGYDGANK LIAYVLASIS NPLRFPGYMY SSIESILSTL VPTPDLKFLT TSISPFASQT NKHVYSNEYD TILELLNDRY KMNRVDQPVQ YTSMLNYLIG NNLDHLEIRK GTIKAQLRVD FVPWAPTSIQ LVHGKKSPFL QAKENGQKNI SGVQVSNNTS IVLVFTKILK QYDLLAKREA YVNSYTGSKD RLEIAKVMEM FNECRESVAS VIEEYRACQN VNYLEDEILG DDQVM
|
| |