Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_51597 |
Symbol | MCM3 |
ID | 7204388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011671 |
Strand | - |
Start bp | 585871 |
End bp | 587524 |
Gene Length | 1654 bp |
Protein Length | 551 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002186377 |
Protein GI | 219113587 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTCGCGCTAA CAGGCCCAGT CGGAGCATCC CCATCGAGTC CTCGTCAGCT TACGTCAGCT TCTTTAAGAC AGTTGGTGTG TGTCGAGGGC GTCGCTACCA AAGTGTCTAC AATAAAACCC AAAGTCGTAC AATCTGTACA CTATTGTCCA ACCACAACAC AACACTCGTC TCGGGAATAC ATTGACGCTA CTGACCCGCA CTTGGGTCTT AACGCCGTCG ACACTACCGG TCGGGAAATC CCGGATAGGG TCATTCATAT TACACCTTCT GTGTACCCTA CCAAAGATAA AGAAGGGCAC GCGCTCGAAA CGGAATACGG CCTGTCGACC TTCAAAGACC ATCAAACAAT TGTTTTGCAG GAAATGCCCG AAAAAGCTCC CATGGGACAG CTTCCACGAT CGGTCGAACT GGTGCTTGAC CACGACCTCG TCGATCGTAT TAAACCAGGG GATCGGGTAC GCGTAGTCGG AACTTACCGG GCATTAGCAG TTTCCTCCAA CGGTCAACAG AGTTCTTCGG GAGTTTTCCG GACTGTAGTG CTAGTCAACC ACGTTCAGAC GATCGGGGTA AGCACAAGCA GACTGCATTT TCACGAAAAC GATGTTCCGA ATATCAAAGA GTTGGCTGCT CAGCCCAACA TTCTGGATGT GTTGGGACGG TCCGTGGCAC CATCAATACA CGGACATGAT ATTATCAAGA AGGCACTCGT ATTGCAACTC TTGGCAGGGG TCGAGAAAAA CTTGGAGAAC GGTACACACT TACGAGGGGA TATTAACATT CTAATGGTTG GCGATCCATC GACAGCTAAA TCTCAACTGC TACGAAGCGC AATGACTATT GCACCGTTGG CCGTTTCAAC CACAGGGAAA GGTTCATCTG GTGTTGGTCT GACGGCTGCC GTGACATCAG ATCCGGACAC TCGTGAACGT CGTCTCGAAG CTGGTGCTAT GGTGCTCGCC GACCGTGGCC TCGTGTGCGT AGACGAATTC GACAAAATGG GCGAGAACGA TCGTGTTGCC ATTCACGAGG CAATGGAGCA GCAAACAGTG ACGATCGCGA AGGCCGGTAT CCATGCCAGT CTTAATGCTC GCTGCGCTGT GCTCGCTGCC GCCAACCCTG TTTACGGGCA GTATGACCGG CGACGCAAAA TCCAAGAGAA TATTGGGTTA CCGGATTCCT TGCTCTCTCG TTTCGATTTG CTCTTTGTAG TCCTCGATCA GATGGACCCC GAAACGGATC GACTTATTGC CGCTCACGTC ATTGGTGGAC ACCGCTACCG AGATGATGAT GGTGAAGATG ACGAGTCGGA CGACGATCAA GAACACTCAC CACCGCAGTC GATCTGGCAA CGCCGGCGGA GAAACGCGGC TACCAACGAA GACGCTTTAA CTCACGATTT TCTGCGCAAG TACCTGCATT ACGCGAAGTC CCGCGTATCG CCAGTCCTTA CCGAAGCAGC ACGTGAATTT ATCGCCCAAA AGTACGCTGA AATGCGATCT CGTCAAGACG ACCGAACCCT CCCCATTACC GCTCGTTCAT TAGAAACAGT CATTCGTCTG GCAACGGCTC ATGCCAAGGC CCGGTTGAAT GCAACCGTCG AACACGAAGA TTGTGTGGTT GCAATGGACT TGCTGAGCTT CGCCCTCTAT CACG
|
Protein sequence | VALTGPVGAS PSSPRQLTSA SLRQLVCVEG VATKVSTIKP KVVQSVHYCP TTTQHSSREY IDATDPHLGL NAVDTTGREI PDRVIHITPS VYPTKDKEGH ALETEYGLST FKDHQTIVLQ EMPEKAPMGQ LPRSVELVLD HDLVDRIKPG DRVRVVGTYR ALAVSSNGQQ SSSGVFRTVV LVNHVQTIGV STSRLHFHEN DVPNIKELAA QPNILDVLGR SVAPSIHGHD IIKKALVLQL LAGVEKNLEN GTHLRGDINI LMVGDPSTAK SQLLRSAMTI APLAVSTTGK GSSGVGLTAA VTSDPDTRER RLEAGAMVLA DRGLVCVDEF DKMGENDRVA IHEAMEQQTV TIAKAGIHAS LNARCAVLAA ANPVYGQYDR RRKIQENIGL PDSLLSRFDL LFVVLDQMDP ETDRLIAAHV IGGHRYRDDD GEDDESDDDQ EHSPPQSIWQ RRRRNAATNE DALTHDFLRK YLHYAKSRVS PVLTEAAREF IAQKYAEMRS RQDDRTLPIT ARSLETVIRL ATAHAKARLN ATVEHEDCVV AMDLLSFALY H
|
| |