Gene PHATR_51597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_51597 
SymbolMCM3 
ID7204388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011671 
Strand
Start bp585871 
End bp587524 
Gene Length1654 bp 
Protein Length551 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002186377 
Protein GI219113587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCGCGCTAA CAGGCCCAGT CGGAGCATCC CCATCGAGTC CTCGTCAGCT TACGTCAGCT 
TCTTTAAGAC AGTTGGTGTG TGTCGAGGGC GTCGCTACCA AAGTGTCTAC AATAAAACCC
AAAGTCGTAC AATCTGTACA CTATTGTCCA ACCACAACAC AACACTCGTC TCGGGAATAC
ATTGACGCTA CTGACCCGCA CTTGGGTCTT AACGCCGTCG ACACTACCGG TCGGGAAATC
CCGGATAGGG TCATTCATAT TACACCTTCT GTGTACCCTA CCAAAGATAA AGAAGGGCAC
GCGCTCGAAA CGGAATACGG CCTGTCGACC TTCAAAGACC ATCAAACAAT TGTTTTGCAG
GAAATGCCCG AAAAAGCTCC CATGGGACAG CTTCCACGAT CGGTCGAACT GGTGCTTGAC
CACGACCTCG TCGATCGTAT TAAACCAGGG GATCGGGTAC GCGTAGTCGG AACTTACCGG
GCATTAGCAG TTTCCTCCAA CGGTCAACAG AGTTCTTCGG GAGTTTTCCG GACTGTAGTG
CTAGTCAACC ACGTTCAGAC GATCGGGGTA AGCACAAGCA GACTGCATTT TCACGAAAAC
GATGTTCCGA ATATCAAAGA GTTGGCTGCT CAGCCCAACA TTCTGGATGT GTTGGGACGG
TCCGTGGCAC CATCAATACA CGGACATGAT ATTATCAAGA AGGCACTCGT ATTGCAACTC
TTGGCAGGGG TCGAGAAAAA CTTGGAGAAC GGTACACACT TACGAGGGGA TATTAACATT
CTAATGGTTG GCGATCCATC GACAGCTAAA TCTCAACTGC TACGAAGCGC AATGACTATT
GCACCGTTGG CCGTTTCAAC CACAGGGAAA GGTTCATCTG GTGTTGGTCT GACGGCTGCC
GTGACATCAG ATCCGGACAC TCGTGAACGT CGTCTCGAAG CTGGTGCTAT GGTGCTCGCC
GACCGTGGCC TCGTGTGCGT AGACGAATTC GACAAAATGG GCGAGAACGA TCGTGTTGCC
ATTCACGAGG CAATGGAGCA GCAAACAGTG ACGATCGCGA AGGCCGGTAT CCATGCCAGT
CTTAATGCTC GCTGCGCTGT GCTCGCTGCC GCCAACCCTG TTTACGGGCA GTATGACCGG
CGACGCAAAA TCCAAGAGAA TATTGGGTTA CCGGATTCCT TGCTCTCTCG TTTCGATTTG
CTCTTTGTAG TCCTCGATCA GATGGACCCC GAAACGGATC GACTTATTGC CGCTCACGTC
ATTGGTGGAC ACCGCTACCG AGATGATGAT GGTGAAGATG ACGAGTCGGA CGACGATCAA
GAACACTCAC CACCGCAGTC GATCTGGCAA CGCCGGCGGA GAAACGCGGC TACCAACGAA
GACGCTTTAA CTCACGATTT TCTGCGCAAG TACCTGCATT ACGCGAAGTC CCGCGTATCG
CCAGTCCTTA CCGAAGCAGC ACGTGAATTT ATCGCCCAAA AGTACGCTGA AATGCGATCT
CGTCAAGACG ACCGAACCCT CCCCATTACC GCTCGTTCAT TAGAAACAGT CATTCGTCTG
GCAACGGCTC ATGCCAAGGC CCGGTTGAAT GCAACCGTCG AACACGAAGA TTGTGTGGTT
GCAATGGACT TGCTGAGCTT CGCCCTCTAT CACG
 
Protein sequence
VALTGPVGAS PSSPRQLTSA SLRQLVCVEG VATKVSTIKP KVVQSVHYCP TTTQHSSREY 
IDATDPHLGL NAVDTTGREI PDRVIHITPS VYPTKDKEGH ALETEYGLST FKDHQTIVLQ
EMPEKAPMGQ LPRSVELVLD HDLVDRIKPG DRVRVVGTYR ALAVSSNGQQ SSSGVFRTVV
LVNHVQTIGV STSRLHFHEN DVPNIKELAA QPNILDVLGR SVAPSIHGHD IIKKALVLQL
LAGVEKNLEN GTHLRGDINI LMVGDPSTAK SQLLRSAMTI APLAVSTTGK GSSGVGLTAA
VTSDPDTRER RLEAGAMVLA DRGLVCVDEF DKMGENDRVA IHEAMEQQTV TIAKAGIHAS
LNARCAVLAA ANPVYGQYDR RRKIQENIGL PDSLLSRFDL LFVVLDQMDP ETDRLIAAHV
IGGHRYRDDD GEDDESDDDQ EHSPPQSIWQ RRRRNAATNE DALTHDFLRK YLHYAKSRVS
PVLTEAAREF IAQKYAEMRS RQDDRTLPIT ARSLETVIRL ATAHAKARLN ATVEHEDCVV
AMDLLSFALY H