Gene PHATR_46924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46924 
Symbol 
ID7204454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand- 
Start bp814952 
End bp815748 
Gene Length797 bp 
Protein Length189 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185960 
Protein GI219121474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0938391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATT CATCGTCTTC CTCACTTCCA GCCTTGCAAA CAGCTGCCAG CTGCGAAACA 
GCCAAGTTCA TGGGAACTTG GTTTGTCATC GCAGTGAAGC CAACAATTTT TGAAAAGACA 
TCCTCTAACG CTGTAGAAAA GTATTCTTTG AAAAAGGGCG AATCGTTCGA TATCGACATT 
GATTTTCAGT TCAACACAAA GGAACCAATT TCATCCAAAA CGAAGAGCCT CCCTCAAAAG 
GGTTATATTG AAGGAGAAAA CAAGGCTGAC TCTAGCCAGT GGAAGGTATC CCCTTTCTGG 
CCGATTAAAG CACCATACCT TATTCTCGAA GTTGATGAGG AGTATGCGCA TGCTGTTATT 
GGATACCCTT CCCGCAATTA TTGCTGGATT ATGTCACGGA AACCCGTCAT GGCAGAGGCG 
ACTTACGCCA AGCTAACAAA GCAGCTAGTT GAAAAGCACC AATACAATCT CGATGGTCTA 
CGGAAAGTTC CGCAGGTATG GACTAACGAA GAGCGCGAAA AGCGTGGTCT AACCCAGGAA 
GAAATTCCTG ATGCTTTACT CCAAGACTAA CACAAATAGT TATGTTGAAA TGTTGAATGT 
GCACGAACGC TGTCTCTGTT TCCTGTTAAT GTTTTTGGCT CGAAGTGACT GGAATAGCAC 
ATCGATCCGT ACTCCAGTGC GGCCGTATTG ATGGCCGTAA CAATTTCTCA CCTGGAACCT 
AAAAAATTGA CTGTGAGGAG AAATGAGATC ACATTTAAAG TCAATACATT CTAGCCTTTA 
CATTTTTGCT TGGGTTG
 
Protein sequence
MGNSSSSSLP ALQTAASCET AKFMGTWFVI AVKPTIFEKT SSNAVEKYSL KKGESFDIDI 
DFQFNTKEPI SSKTKSLPQK GYIEGENKAD SSQWKVSPFW PIKAPYLILE VDEEYAHAVI 
GYPSRNYCWI MSRKPVMAEA TYAKLTKQLV EKHQYNLDGL RKVPQVWTNE EREKRGLTQE 
EIPDALLQD