Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_28234 |
Symbol | rpl2 |
ID | 7204554 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 507498 |
End bp | 508578 |
Gene Length | 1081 bp |
Protein Length | 257 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185719 |
Protein GI | 219120975 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.638688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTTGCTCGGT GTATTCCGTT GTCGTGTCGT CGATTTCACA GATAAATCAT TCACCATGGG TAAATACGTC CAGGTAGGTT GACCTTGAGT GGACAAAAAC TAGAGTATCC GTAAGGAGGA GGAGGAGCTT TCTTAGTCAA TCGATGCCGT TCGAATAGAG GGCTCCATGT GTGCCGGGAG GTATTCTTTG CAAAAGAAAA ACGCGAGGGG ACCCTGTTTC CTGTTTTTGG TAGGAAATAT GAACGCTACG ATTCCTTCTA ACGGTGTTTA TCGTCTTTGC GTTTTCTGTT ATTCAGGCCC AACGTAAGGG AAAGTCCCCT ATTTTCCAAG CGCACACGCG GACTCGCAAG GGTGCCGTCA AACTTCGCGC TCTGGATTAC GCCGAAAAGC ACGGTTACAT CCGCGGCGTC GTGAAGGAAA TTCTGCACGA CCCCGGTCGC GGAGCTCCCG TCGCCAAGGT TCAGTTCCGC GATGCTTACC GCTACCAGCG CAACAACGAA CTCCTCGTTT GTACGGAAGG CATGTACACG GGACAGTTCA TCTACTGCGG CAAAAAGGCG TCTTTGACCG TCGGCAACGT CCTGCCGCTT TCGGCCGTCC CGGAAGGCAC CATTGTCTGC AACGTCGAAG CCAAGTTGGG TGACCGTGGG GCCTTTGCGC GCGGCTCGGG AGCCTTTGCG GTTGTGGTCT CGCACGACGA TGATAAGGGC ACCACCCGGT TGCGTCTACC CTCGGGCGGC AAAAAGTCCG TTCCCTCTGC GGTCCGTGCA CAAATCGGTA TCGTGGCCGG AGGCGGACGT ACCGATAAAC CTCTGCTCAA GGCCGGACGG GCCTACCACA AGTATTCCGT TAAGCGGAAC TGCTGGCCCA AGATTCGTGG TGTGGCTAAG AATCCCGTGG AGCATCCTCA CGGAGGAGGT AACCATCAGC ACATTGGTAT GCCCAGTACA GTTGCTCGGG ACCGTCCCGC GGGTCGGAAG GTTGGTTTGA TTGGAGCCCG CCGAACTGGA CGTCTTCGTG GAGCCCGAAA GACGGCACAA GATAAGGATT AATCCCAATA AAGATTTTCT ACTACAGCGA C
|
Protein sequence | MGKYVQAQRK GKSPIFQAHT RTRKGAVKLR ALDYAEKHGY IRGVVKEILH DPGRGAPVAK VQFRDAYRYQ RNNELLVCTE GMYTGQFIYC GKKASLTVGN VLPLSAVPEG TIVCNVEAKL GDRGAFARGS GAFAVVVSHD DDKGTTRLRL PSGGKKSVPS AVRAQIGIVA GGGRTDKPLL KAGRAYHKYS VKRNCWPKIR GVAKNPVEHP HGGGNHQHIG MPSTVARDRP AGRKVGLIGA RRTGRLRGAR KTAQDKD
|
| |