Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5685 |
Symbol | |
ID | 7198800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 244733 |
End bp | 245506 |
Gene Length | 774 bp |
Protein Length | 258 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184927 |
Protein GI | 219129503 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.346261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAGTT CAGGATCGGG CTACGATCTT TCGTCATCGA CGTTTTCTCC GGACGGTCGT CTCTTCCAAG TGGAATACGC CACGAAAGCC GTCGAACAAG CCGGTACCGT CATTGGGATT GCCTGTCAAG ACGGTGCGGT TGTCCTCGGT GTATCCAAGC CCATTCTACA CAAAATGGTG GTCCCCACCA CGGGTTCGTA CAAACGCATT CACCACGTGC ACGAACGCGC TGGAGTCGCT TCCACCGGTT TTCTACCCGA CGCACGTGTC CTCGTGTCCC GTGCCATGGA CGAAGCCTCG GATTGGAAGG CACAGTACGG TACCTCGATT CCCCCGGATA CCTTGGCCGC GCGACTGGGA TCCTACGTGC ACTACTTTAC ACTCCACGGG GCCCTCCGGC CTTTTGGAGC CGCCGCCGTC CTCGCCAGTT ACGACGAAGA AGAAAAGGCA GCCTGTTTGC ATCTCGTCGA ACCCAGTGGA AATTCGCATG CGTACTTTGG GGTAGCCGTG GGTAAAGGCA AACAAGCCGC CAAGACGGAA TTGGAAAAGC TGAATCTGCA CAAGACCAAG CTGTCGGCCA CCCAGGCGGT GCAGGAAATC TGTAAAATCT TGATTTTGTT GCACCAAGAG AATAAGGAAA GTTCCAAACC GCTCGAACTG GAGGTATCTT GGCTGACGAA AGAGAACGAC TTTCGTCATG TGGGAGCGCC ATTGGAAATG ATCCAACAAG CCAAAGAATG GGCGCAAACC CAACTGGAAC AGGAAGAATC GGAT
|
Protein sequence | MASSGSGYDL SSSTFSPDGR LFQVEYATKA VEQAGTVIGI ACQDGAVVLG VSKPILHKMV VPTTGSYKRI HHVHERAGVA STGFLPDARV LVSRAMDEAS DWKAQYGTSI PPDTLAARLG SYVHYFTLHG ALRPFGAAAV LASYDEEEKA ACLHLVEPSG NSHAYFGVAV GKGKQAAKTE LEKLNLHKTK LSATQAVQEI CKILILLHQE NKESSKPLEL EVSWLTKEND FRHVGAPLEM IQQAKEWAQT QLEQEESD
|
| |