Gene PHATRDRAFT_5685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5685 
Symbol 
ID7198800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp244733 
End bp245506 
Gene Length774 bp 
Protein Length258 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184927 
Protein GI219129503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.346261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGTT CAGGATCGGG CTACGATCTT TCGTCATCGA CGTTTTCTCC GGACGGTCGT 
CTCTTCCAAG TGGAATACGC CACGAAAGCC GTCGAACAAG CCGGTACCGT CATTGGGATT
GCCTGTCAAG ACGGTGCGGT TGTCCTCGGT GTATCCAAGC CCATTCTACA CAAAATGGTG
GTCCCCACCA CGGGTTCGTA CAAACGCATT CACCACGTGC ACGAACGCGC TGGAGTCGCT
TCCACCGGTT TTCTACCCGA CGCACGTGTC CTCGTGTCCC GTGCCATGGA CGAAGCCTCG
GATTGGAAGG CACAGTACGG TACCTCGATT CCCCCGGATA CCTTGGCCGC GCGACTGGGA
TCCTACGTGC ACTACTTTAC ACTCCACGGG GCCCTCCGGC CTTTTGGAGC CGCCGCCGTC
CTCGCCAGTT ACGACGAAGA AGAAAAGGCA GCCTGTTTGC ATCTCGTCGA ACCCAGTGGA
AATTCGCATG CGTACTTTGG GGTAGCCGTG GGTAAAGGCA AACAAGCCGC CAAGACGGAA
TTGGAAAAGC TGAATCTGCA CAAGACCAAG CTGTCGGCCA CCCAGGCGGT GCAGGAAATC
TGTAAAATCT TGATTTTGTT GCACCAAGAG AATAAGGAAA GTTCCAAACC GCTCGAACTG
GAGGTATCTT GGCTGACGAA AGAGAACGAC TTTCGTCATG TGGGAGCGCC ATTGGAAATG
ATCCAACAAG CCAAAGAATG GGCGCAAACC CAACTGGAAC AGGAAGAATC GGAT
 
Protein sequence
MASSGSGYDL SSSTFSPDGR LFQVEYATKA VEQAGTVIGI ACQDGAVVLG VSKPILHKMV 
VPTTGSYKRI HHVHERAGVA STGFLPDARV LVSRAMDEAS DWKAQYGTSI PPDTLAARLG
SYVHYFTLHG ALRPFGAAAV LASYDEEEKA ACLHLVEPSG NSHAYFGVAV GKGKQAAKTE
LEKLNLHKTK LSATQAVQEI CKILILLHQE NKESSKPLEL EVSWLTKEND FRHVGAPLEM
IQQAKEWAQT QLEQEESD