Gene PHATRDRAFT_56522 details

Gene Information

• Locus tag: PHATRDRAFT_56522
• ID: 7200318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 274715
• End bp: 275407
• Gene Length: 693 bp
• Protein Length: 230 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179172
• Protein GI: 219116755

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTCTA AAACATCCCA TCAAAGACAC TTGCGGCGTC GAGGCGTTCT CATTTTCTTC 
CTGTTGGTAT CTACTTTGAC CGAGGCTTTC CAGGTTGCAC GAACTCGATC AAGATTTCCG 
TCCTGTCCGA TATCCGGAGG CGCTACCTCT GCTACAATTT TGTACTATTC AAATACTACG 
GATGGATCGG AAGTAGCGCA ACGTAGCTTC CAAGATCGCA TGCGAGAACT CGCACTACCG 
ACAAAGAATT TGAAAACCAA TTCTCGAGGT CCCTCCACGA AGTATGACGT ACAAGAGATC 
ACTTCTTTGG CACAATATAA GCGCATCGTG GGTGACGAAC CTTCCAAGCT GTCCGTCGTT 
CGATTCTACG CTCCCTGGTG CCGAGCATGC AAAGCAGTGG CGCCTGCGTA TTACAGTTTG 
AGCAAAAAAT ATTCTAACTA TGACGTGCAG TTTTTGCAAG TTCCTGTCAC ACGTGAGACA 
ACCTCGCTCC ACCAAGGCTT GGAAATCCCT TCGATACCGT TCGCCCACGT CTACCACCCT 
GTGGGTGGTT TGGTAGAAGA ATTACGCTTC ACAAGAAAGC ATGTGACTGG ATTTGATCAG 
ATTTTACAGT CGTACAAAGA TCGTTCATGT ACCTTGCCCA CGGACGTGGA TCCAGACACA 
GGTGTCTTTT GTGCACCGTA TGAGCGAACT TAA 

 

Protein sequence

MHSKTSHQRH LRRRGVLIFF LLVSTLTEAF QVARTRSRFP SCPISGGATS ATILYYSNTT 
DGSEVAQRSF QDRMRELALP TKNLKTNSRG PSTKYDVQEI TSLAQYKRIV GDEPSKLSVV 
RFYAPWCRAC KAVAPAYYSL SKKYSNYDVQ FLQVPVTRET TSLHQGLEIP SIPFAHVYHP 
VGGLVEELRF TRKHVTGFDQ ILQSYKDRSC TLPTDVDPDT GVFCAPYERT