Gene PHATRDRAFT_56521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_56521 
Symbol 
ID7203486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011684 
Strand
Start bp319846 
End bp320422 
Gene Length577 bp 
Protein Length169 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182660 
Protein GI219124751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACTT GTTGCATTGG TGGAGTTTGT ATTCCATACT CGGCTATAGT GCCATTTTTG 
CTTATGTGCC TGAAATGGGG CGTCGGTTAC TTGAAGAGCA TTTTTGTTGC GCCAGTCTTG
ACAAATAAAA TTGGCAACAC GGGAACCAAT CGGTCTTCTC GAACATGTTG CTCCTCCACT
ACTCTCTGTG AAGATGAATT GAAATCGATG GAAACAACTG CAGAGTTTGA CAATGTACTG
TCTTCTAGGA ATAAAGTGAT TGTCAAGTTC ACGGCTTCGT GGTGCCGACC ATGTCAGCAG
ATTCAGCCTC TATTCAATCA ATTGTCGGCA AAGTCGCGGT CAACTGAATT TCTTACAGCC
GATGCCGATG ATTTAGACGA AATTGCTGCG CGGTATAAAA TCGCTATTCT ACCGACCTTT
GCGGCATTTC ATAGCGGCAA ACTTGTAGGC AAGTACGTGG GTAGCAACGA GGAAAAGCTC
AAAGCATGGG TTTCTGAAAT GTCGACGTAG GCGAAAAGCC ACTACCATGT ACGAACAAAT
AGCACCTCAA ATAACAGCCT ATAAAAAGAG TCTATTT
 
Protein sequence
MSTCCIGGVC IPYSAIVPFL LMCLKWGVGY LKSIFVAPVL TNKIGNTGTN RSSRTCCSST 
TLCEDELKSM ETTAEFDNVL SSRNKVIVKF TASWCRPCQQ IQPLFNQLSA KSRSTEFLTA
DADDLDEIAA RYKIAILPTF AAFHSGKLVG KYVGSNEEKL KAWVSEMST