Gene PHATRDRAFT_56492 details

Gene Information

• Locus tag: PHATRDRAFT_56492
• Symbol: ZEP3
• ID: 7197634
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 1118248
• End bp: 1120587
• Gene Length: 2340 bp
• Protein Length: 557 aa
• GC content: 49%
• Product: zeaxanthin epoxidase
• Protein accession: XP_002178367
• Protein GI: 219115143

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.688102
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCACACCCTT CACAATCTCC CAGGTCGATC GTGATTAGAA AAAGATTTGC ATCATGAAAA 
GATCTTGCAG TATAGTCACA ATCCTATACG TAGCCACCAC GGTGAGGGCT TTTGCTCCCG 
CCCCACTGGT ACAATCAAGG TATGTGTGTT CTGTAGACTT GTCTCGGTAC TCTCTGTTAT 
CAAGAATACC AGGTAGTGGG CTTCCACCGG GATAGGGAAT GCCCCATTTT GTTATTGTCA 
ATTTGTCTTC GCCGATCGGG TCGGATGGTT TCCTTTGACG GCTTTTTCTT TTGTACTGAT 
TAGAAAAGTT TGTGGCAGAA ATAGCGTTCT TGTCCGGAGG CCATTCGCTA GCTCGCTCCC 
AATTTGACCT GTATCGCTGT TTTACCTTAT CTCGGCAATC CCTGACGGAA TGCGAACTTC 
ATTTATGCCA GACCCCCGTC ACAGTCAATC ACTCACACGT CCACTCCTAT TCCTCTTGTG 
TGCCCTTGCG TGTCTCTATA CAGCTGCTTC TTCCAGAGAC AACCCACTAC AACGGCCCGC 
TTTGTTTCCG GCACGGCACC ACCTTCGAGC AATGTCGCCT CGGAAGAAAA GGTGGACGCC 
ATTTCTGAAG CGCACCGGCT CAAAGTGCTG ATTGCTGGCG CCGGAGTTGG TGGTCTTTCC 
TTGGCCAAGG TTTTGACCAA GATGCCCACC ATGGATGTTA CCGTACTGGA ACAAACGTCC 
GAATTCAAAC GGTTCGGTGG ACCCATCCAG CTCGCTAGTA ACGCAATGGA AATTCTCAAA 
CACATGGACA AGCCAGTATT CGACAAAGTC ATGGAGAAAT TTACCTTCAC CGGTGACAAA 
GAAAACGGTA TTAAGGATGG TATTCGGACG GAATGGTACG CCAAGTTTGA TCTCAAAACG 
CCGGCAGAAA ATCGCAACAT GCCGTATACG GGTGTCATAG AGCGACCAGA TTTGCAACAG 
ATTTTTTTGG ACTCTTTGCC CAAAGGAACC GTTAAGAACG GCGATGGCGT GGCTCGCTAT 
GAAAAATTGC CCGATGGCGG CGTCAAGGCG GTACTCAAGT CCGGGAAGGA AGTCTACGGA 
GACGTCTTAA TCGGGGCGGA CGGCATTTGG AGTGCGGTGC GGGCTACTAT GCGGGATAGT 
CCAGCCAAAG GCGACGGTAG TGGTGCCACC TACTCGGGGT ACACGGTTTT CGCTGGCGAA 
TTGGCGTACG ATTCCTTCGA CAATGGTCAA GTTGGGTACA AAGTGTACAT AGGACCAGGT 
ACGTGTGCTC CTCCTGAAGC CCTTTAAAAA ACATGATGAT TTCAGAGCTG ATAGCGAAAA 
ATAAAAAATT GCTCACCTTC CTTTTATTTC TCTCAATAGG CCAATACTTT GTGATTACGG 
ACATTGGCAA CGGCAACTAC CAGTGGTACG CATTTTTGGC ACGACCCGCG GACAGTGCCT 
CCTCTACTGA CATGCCCGAC GGTCAATCCA AATACTTACA AGAAATTTTC GCGGGCTGGT 
CAGAGGAAGT TCACCACATC CTCAGGGCTA CTCAGGAGCA TGAAATTGAA CAGCGCGACT 
TGTACGATCG TCCGCCGTCG GCCATGAAAC CATGGACGGA TGGACCGGTG GCGTTGTTGG 
GAGATGGCGT ACACGCCATG ATGCCCAACT TGGGGCAAGG TGGATGCCAG GCGATCGAAG 
ATGCTTTTGT CATTGGACAA GAGCTCGGTT CAGCAACGAA GCGCAGTCAA ATTGTTGACA 
AGCTTCGTGA GTACCAACAG CGTCGTTTGA TTCGCTCGGC GGCCGTCCAA GGTTTATCTC 
GTTTTGCCTC GGATATCATC ATTCGTGGTT TCGATACGCC AGCGAAAATT TACCGTGACG 
AAAATGGCAA ATTTCAGTTC GAAAATTGCA ATTATGCTGG AATCGTTACC AAAATTCTTC 
AACCGATTCT GCCTATCTTT TTTTCGGTTC AATTCGCTTT TTTGTACGAT GGTTGGAAGA 
ACGACAAGCA GATCGATTTC AAGGCTTTCC TCGGTTTTTC TGTGCTGGGT GGACTGATCG 
TTTCTCTGGT CCTATTTGAG CTTGCTGAAG CTGGTCTGGG CATAGGCTTG GGTGCCGAAG 
CATTGTTGGG GGCGGAAGGT CTGTTGGATT TTGGAGGTAT TTCTGCCGCC ATTCAAGACT 
TCTTTCTTGG AGGTGGCGCA GCCGGTTTGT AAACGACTTT GCTCAATACA AAATGCATTA 
TTTTCTCCTT GAGCTAGATG ATTTGATTTC TAGCTTACTT TTTTCACATT CAGATGGAGG 
AAGCTATCAG ACTAACAAGC ACAACAGCAT TAACTTCTAG ATGCAAGCCT AGCAAATCCT 

 

Protein sequence

MKRSCSIVTI LYVATTVRAF APAPLVQSSC FFQRQPTTTA RFVSGTAPPS SNVASEEKVD 
AISEAHRLKV LIAGAGVGGL SLAKVLTKMP TMDVTVLEQT SEFKRFGGPI QLASNAMEIL 
KHMDKPVFDK VMEKFTFTGD KENGIKDGIR TEWYAKFDLK TPAENRNMPY TGVIERPDLQ 
QIFLDSLPKG TVKNGDGVAR YEKLPDGGVK AVLKSGKEVY GDVLIGADGI WSAVRATMRD 
SPAKGDGSGA TYSGYTVFAG ELAYDSFDNG QVGYKVYIGP GQYFVITDIG NGNYQWYAFL 
ARPADSASST DMPDGQSKYL QEIFAGWSEE VHHILRATQE HEIEQRDLYD RPPSAMKPWT 
DGPVALLGDG VHAMMPNLGQ GGCQAIEDAF VIGQELGSAT KRSQIVDKLR EYQQRRLIRS 
AAVQGLSRFA SDIIIRGFDT PAKIYRDENG KFQFENCNYA GIVTKILQPI LPIFFSVQFA 
FLYDGWKNDK QIDFKAFLGF SVLGGLIVSL VLFELAEAGL GIGLGAEALL GAEGLLDFGG 
ISAAIQDFFL GGGAAGL