| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55108 |
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| Symbol | |
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| ID | 7198370 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011692 |
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| Strand | - |
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| Start bp | 346647 |
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| End bp | 349341 |
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| Gene Length | 2695 bp |
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| Protein Length | 718 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | heat shock factor |
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| Protein accession | XP_002184603 |
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| Protein GI | 219128822 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.260689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGGAA GCGCCTCGAG CCCGGTTTCC GTACGTTCCG TTCCAACTTG CGGGGGTTTG
GTCGAGAGTC TTGGTGTACA ATCGTCCGAG TCTGCGCGTG TGTGTGTGTG TCCACCATGG
CCGGCCCCGG CCCCGGTTGA AGGACGGTAG GTTTTTTGTA AAAGTACAGA CGACTTCTAT
GTATAGTAAT AGACGTCAGA CGGGCTGACT GTGTGACTGT GACTGTCTGA GAACGAATCG
AGACCCTGTG CATTCCATCC TGGCCTATTC AGAAGTGGAT GCACAAGTTA CCCTACAGGG
ACTGTTCATA CTACTGTGGA AGGGTTGGTA GTGCAGTTCC AAATCAATCG ACTCGCAGCT
CTTGGAAAGC CCCCCTCTTA CCCATTTACC CTACCCCTGT CTTCGTCACA CCCACACAAA
CCGACAACCC CCTTTTTACA TATCCTCCAA AAACAGACAA CGTGCATTGC ATTCACTTGT
CCCTCCTTCG ATCCCCGTTG CCCACCGGTC GACCAACCCG CGCTTCCTGG CGTCTCGTCT
ACAAAAACCT AGAGGCACTC TCGTCCGTCC GCTTGCGTCT CTCAATGGAC AACCACAATC
ACAACAACAA TCCGTCGCAT GTCCGGAACG CCTTCGCTCC GGGAGCGTGG ACTCCGTGGC
GCGTTCCACC ATCATCGCAC GAGCCTCGTC GTGACGACGC GTCCGACACA CTCCGAAACC
AACCCTTGTT CTCGGCGTCG CGGACTTCGA CTACTACCAG ATCCAGTACT ACTATTACTA
CCACTAATAC TACTACAGGC GGCACCGTAT CAATGTCGGA CAAAAAACGG CGTGGTCGTC
CTAGAACCTC CAAGGAGGGG ACCGCCTCGT CCACCGCCTC GCCCAGTACG GTGGGATCCA
AGAAATTGCC TCAATCGTGT CGATGTAATT TTGGACTCTT TCTGGATACC ATGGTTCGCG
AAGTTAGCTT AACCCGACCA GACTTGGTCC ACTGGACCAG GGATGGTTCC GGATTCTTCA
TTCATCAGGA ACGCAGTGCC GACGTGAGTC AAATACTGGC CAAATACTTT CTCCGTACGT
ACCGGGACGC CGCAATCGAC CCCCGACAAT GCATTCCGTT CTACTCACGG TCCCACGAAT
CACTCACACT CGTTGTCCTG CTTCACAGAC GGGAATTTTG ATTCCCTTCG GCGACAATTG
AACGTCTACG GCTTTCGCAA ACAAAAGAAG CCCGGTCCGT AAGTAGTACA ATAGTGTCAG
AGCCCTGCTC GGATTGGATT CCCGTGTTTC ACCCCACGAA CCAAACCGTA TTTTACACTC
AATCCAACTT TGCTCACATA CATACACACA CACTCACACC GTCATTGTCA ATGGTTTCGT
ATCTCTACTC ATTTTGCCCC GCAGGAATAG AGGCAGTTTC CATCATCCCG ATTTTCACCG
GGACCGACAG GGGGATTTGG ACGAAACCAA TCAGCCCCGT GCACCCTCTA TCAAACCCAG
CAAGCGCGAG CGACGCAAGA AAAAAGAGTC CGAATCGGAA TCCGCCTCCG ACACCCGGGG
CGGAATGGCA CATCGAGTCC GCCACACACC CACTCCCCAA CGGAAAGACG ACCCTATCCC
TCCTAGCGTG GTTGCCGCCA CGATCTCCGC CGTACCGGTC CACGAACAAT CGACGGGAGA
GCCAGAACCG AAAAAGAAAA AATATACCAG GAAAAAAGAC GAGACTAACA CGGTGGCTTG
CGTTAAGGAA GCGATGCCCC CGCCACCCTT GGTTCTGCCG GAGGGGTCTG CCGATGTGAC
GTCGTTAAAC GCCATCATAG CCGACGCCCT CCACGAATCC ACAGCCGCGG CCAAGACGAA
AAGTCGCCGA CGAAAGAAAG CACGACGCCT CAATCAAAAC TACGCGACCT TTCATCATCT
GTATACTACG CCGGTCTTTT CCGAAGATTA CTCTACCGGG GTTTACACTG GTGCAGTCCC
TAACTGTGCA GTATACGGCC CACCGTACTT GCCCGTGATT CCGGAGGATG ATACCATTGG
TCACGGCATC TGGCTGGACG GCGTTGCTCA GGAAGAGCCG TTGCGCGAAG GACCAACAAA
AGTTGATTCG GACGTCGTGC CGGAACGGAA ACCAAGGAAA ACATACACTA GGAGAGGCAC
CGCGGCTACG AAGGATGCTG CCAAACAAGC GAAACACAAG GACAACAAAA CAGTCAAATC
AAAGCCGCCC CGCCAAAAAA GTGGACAACG TGAACCCCGT GTTCGACCCA GACTCGAATT
CCAGAAAAGG GTTCCGCGGG CTGAGAAATT ACCCGTCAAG AAAGATAGCA GAAACATCGC
GAGGCGTCCC GTCATGGATG TAGACATGGG TGAAATCGAT TTGACCGACA TATCCACGCT
GCCGCGGGGC GTTACGATGC GCCCCTCAGG AAAGTGGCAA GCTCAGCTCT ACTTCAACGG
TCGATCACGC TATATTGGAG TCTTTGATAA TGCGCGATGC GCCGCGTTCG CGTACAGGAT
TGTGCACCAA CGGCTGCGGC ACGACAAGTA TCATTTCCTG AGCAGCGATG TTGCTACCGA
AGTTTTTGCC AAAGTTCGGA TCGAGGCAAA CGATGCCGTG GACAACTTAC TGAGGGGGAA
AACCACTGAA AAGGAGGCAT TAGATAGGCT CGCTGAAAGT GAATCTCTGC TCTAG
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| Protein sequence | MHKLPYRDCS YYCGRVGSAV PNQSTRSSWK APLLPIYPTP VFVTPTQTDN PLFTYPPKTD
NVHCIHLSLL RSPLPTGRPT RASWRLVYKN LEALSSVRLR LSMDNHNHNN NPSHVRNAFA
PGAWTPWRVP PSSHEPRRDD ASDTLRNQPL FSASRTSTTT RSSTTITTTN TTTGGTVSMS
DKKRRGRPRT SKEGTASSTA SPSTVGSKKL PQSCRCNFGL FLDTMVREVS LTRPDLVHWT
RDGSGFFIHQ ERSADVSQIL AKYFLHGNFD SLRRQLNVYG FRKQKKPGPN RGSFHHPDFH
RDRQGDLDET NQPRAPSIKP SKRERRKKKE SESESASDTR GGMAHRVRHT PTPQRKDDPI
PPSVVAATIS AVPVHEQSTG EPEPKKKKYT RKKDETNTVA CVKEAMPPPP LVLPEGSADV
TSLNAIIADA LHESTAAAKT KSRRRKKARR LNQNYATFHH LYTTPVFSED YSTGVYTGAV
PNCAVYGPPY LPVIPEDDTI GHGIWLDGVA QEEPLREGPT KVDSDVVPER KPRKTYTRRG
TAATKDAAKQ AKHKDNKTVK SKPPRQKSGQ REPRVRPRLE FQKRVPRAEK LPVKKDSRNI
ARRPVMDVDM GEIDLTDIST LPRGVTMRPS GKWQAQLYFN GRSRYIGVFD NARCAAFAYR
IVHQRLRHDK YHFLSSDVAT EVFAKVRIEA NDAVDNLLRG KTTEKEALDR LAESESLL
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