| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54981 |
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| Symbol | |
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| ID | 7195404 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 321187 |
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| End bp | 323255 |
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| Gene Length | 2069 bp |
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| Protein Length | 539 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183725 |
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| Protein GI | 219126984 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.458082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTAT GTTGCCTTCC AGCCACAAAA AAAATCCAAC AAAAACCAGA ACCCGTCTGC
GGTGTCATAA AACCCAAGTA GCAGAATGTC GAGTAGTGCT ATCTATCAAT CTTGCGCCGG
TCAATTCGAT AGCGGTGAGC AGCTTGATCA GCTTCTGCAG TGCCTCTCTA CGGGACATGA
CGGCGTAAGT AAAGAGGGGA ACGGGGTCGG CTCTTCTTTT CATTCGATAC TGACTTTTAA
CACATATCAC CCTCCTTTCG CTGTGGTTCA GGCGCTAAGC GATCAGACCA GCAACCTCGC
AGGAGGTATC GATGCCTTTT ATCTTATCTT TGCCGGGGCC CTTGTCTACT TCATGCAGAC
AGGATTTGCT ATGCTCTGTG CCGGATCCAT TCGAGCGAAG AATGTCAAGA ATGTGATTCT
CTGGAACTTG CTCGATTCAT GTGGAGGCGG TCTCGCGTTC TGGAGTGTAG GCTATGCCTT
TGCCTACGGT GGAGACAATG CTGGGTCCAA GACATTTGTT GGTAACGCAG GCTTTTTCCT
CCAGGGAGAT GACATTCGAC TGGAAAACTG GTTTTTCCAA TTTGCCTTTG CTTGTGCCCT
TTCCTCAATT GTCGCTGGAA CGGTAAGATA ATGATGCAGC ACGCATTTCT CTATGCATTG
ACACACGTCG GCACTAATTC AAGCCGCTGT CTTTAATGAA TTTCAGATCG CTGAGCGCAC
TCAAATGAAG GCCTATTTGA TGTATTCCGT TTTTTTGGCT GGGTTTGTCT ATCCAGTTGT
CGCCCACGCA TTTTGGTCGA GCAACGGATT CCTCTCCAAC ACAGCCACAG ATCCATTGTG
GGGATCTGGC GCCATTGACT TGGCGGGCTC TGGACCAGTC CACATGACCG GAGGTGTTAC
GGCTTTGGCG GCAGCTCTGG TTTTGGGCCC TCGCATTGGT CGCTTCTACG ACAAGGAGGG
CAATCCTCTC GAAGAGCCAG CCGAATTTCC TCCCCATTCG GTTGCCTTGC AGTTTCTGGG
AACGTTTTGT CTTTGGTTTG GCTGGTACGG CTTTAACCCA GGTTCCGTCT TCTTCATTTC
GAGTATTGAA AACGGTCAAG TTGCGGCTTT GGTAGCCGTC AATACCACCC TAGCTGCGTG
TGCGGGTGCC GTCAGCGCCA TGTTTACTTC AACTTTATTT GACTACTGGT ACACCGGCTT
GCACACATAC GATTTGGGCT ACACTATGAA CGGATGTTTG ACGGGATTGG TCGCGATAAC
AGCGGGATGC GCGGTAAGTA GGACGCGACT TTCAAAACAG TTATTCTTCA TAACTCGCTA
ACTATGACTA TTGCGATACT GTGTTTTCCA GACTGTTGAA ACGTGGGCTG CCGTCCTGAT
TGGTATTGGC GCTGGTTGGT TTTACCTGTT GGGTTCAAAG TTGCTTGTCT ACTTCCGTAT
TGACGATGCT GTCGACGCCA TTCCCGTGCA TATGGTGGGT GGCGCCTGGG GTGTGATCGC
GACGGGCCTT TTTACGAAGG GAGAACTACT ATTGGCCGCC TTTGGCCAGG AGGAACATGT
TGGATGGTTC TACGAGTGGG GCAGTGGGAG CGGTAACTTT ACCCTAATCG GAATTCAATT
GCTGTCTGTG CTGTTCATTT TCGCCTGGAC TTTTTCCGTC ATGGGAATTT ATTTTTACGC
CCTTAGCTTC ATGGGTTGGT TGCGCATAGA TCCGTTGGAA GAGGAGGTTG GTATGGATAT
TTCGCGCCAC AAGGGCTCGG CATACGACAT GACTTCAGCA AATATGGAGC AGGTACGGTC
GTTGATGGAC GACCGCAGTA CGAGCAATCG AGGCAAGCTG CGTAAGTCGT CCATCATTGA
GAAGCCGGCC AAAACAGGTC CGATCGAGGG AGGAACTGCC TCCGGAGAAT CAGAAATTAA
GGAGTCGGAC GTGGAACATG CCGAGAGGGT CTAACCATTG ATTCCACTTT CGCCAACCAG
GATTCAGAGT TTTGCCTTCA TGAGCGTGGT GTTTGAAAGT GTGGGTTTAC TCTTAGGTAA
TGCTACCTCT AGTTAGTGCA TTTAATCGG
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| Protein sequence | MSSSAIYQSC AGQFDSGEQL DQLLQCLSTG HDGALSDQTS NLAGGIDAFY LIFAGALVYF
MQTGFAMLCA GSIRAKNVKN VILWNLLDSC GGGLAFWSVG YAFAYGGDNA GSKTFVGNAG
FFLQGDDIRL ENWFFQFAFA CALSSIVAGT IAERTQMKAY LMYSVFLAGF VYPVVAHAFW
SSNGFLSNTA TDPLWGSGAI DLAGSGPVHM TGGVTALAAA LVLGPRIGRF YDKEGNPLEE
PAEFPPHSVA LQFLGTFCLW FGWYGFNPGS VFFISSIENG QVAALVAVNT TLAACAGAVS
AMFTSTLFDY WYTGLHTYDL GYTMNGCLTG LVAITAGCAT VETWAAVLIG IGAGWFYLLG
SKLLVYFRID DAVDAIPVHM VGGAWGVIAT GLFTKGELLL AAFGQEEHVG WFYEWGSGSG
NFTLIGIQLL SVLFIFAWTF SVMGIYFYAL SFMGWLRIDP LEEEVGMDIS RHKGSAYDMT
SANMEQVRSL MDDRSTSNRG KLRKSSIIEK PAKTGPIEGG TASGESEIKE SDVEHAERV
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