| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50961 |
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| Symbol | |
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| ID | 7201619 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011678 |
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| Strand | + |
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| Start bp | 70682 |
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| End bp | 72709 |
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| Gene Length | 2028 bp |
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| Protein Length | 357 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002180748 |
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| Protein GI | 219119999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0280626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCG GAAATGTGAA ACCATGGAAA GCTCTGTCCG TCTGTCCCGA TGACAACATA
CAAGACTAAA ATTCTATACC GCGAGGTGCA AGGGACGACA TGACGCGCGT CTCAACGATG
CCTGGGTTGA CATGATGTCT GTCATCCGCC ACAGATGACA GACATATTTG ACTAACAGTA
ATGTAAATAC ACGAAGGACC GTGACACAAG ATTTTCATTT GGTTCGCCGC TGATTCCATC
ACGTGACCGT AGCTGTTTAT AGCAACGTCT ACTTCTTTGA TCGGGATTTC CTCTCGCTAG
CATCGTTTCC ATTGCGAACC ACAATGTTGC AAACTGGGTC TCGGTCGGCT CTACGATGCC
CGAAGGCGAC CCTACGTTAC TTTTCTGGCG GCGCAGTGAA ACTGCATTTG CCTGCTCTCG
GCGCTACCGT ATCGATGGCG GTCGGTCACG GCAATAGTGT GAACCCGAAC ACGATTAACT
ATAGAGAACG ACACCAGTTT CCGGTGAAAT CTTGGAGGTA CGCTTCTACT ACAGCTGCTC
CATTATCCAT TACGGACACC GAGCGAGAAA TGATAACCCA CTATGCGCAC GAACCGCAAA
CGTCCGTTTC GCTACAAGCT TTGATGCGTA CCGGTCGCGG CGAGTACTTG CACAAGACCT
TTGCGGAAGA GAAGCTTGAG CGCCACGCAG CGACGGAACT TGTGTTGATC CAAGTAGCCG
GATTCTTACG TCGCGAGCTG CCCATCCGAC TCGCTCATCG TATCCGCGAT CTGGAAGGCA
TACCACTACT CAAGGACATG GCCAGTATCC AGTTGGTAAG GGACTTGTAC GTGAAGAGTT
TTCTTGAATT GCTCAGCTTC GACAAATTGA TACAATCAGC CGAACAGGAA GAAGGGTTCG
CTGCCTTGAT TGAAAATATC TACGATCGGC ATTCCAAAGT TCTGGTTCAA ATGGCCCAAG
GTGCGTACGA GTTCCGCAGC GCTGTTCGCC AAGAGAAGGG GGCGGACGGG TTTGAATTAC
AGGAAGAAAC GCACCGCTTC TTGGATCGTT TTTATTTGGA TCGCATCGGT ATTCGGGTGT
TGATTGGCCA GTATCTGGCC TTGCGGCAAC CGCCGGTGGA AAACTACGTC GGTATCATAT
GCTCCCATAC TTCGCCTTAC GAAATTGTCA AGCGTGCCAT TGATGATGCG GCTTTTATGT
GCACACGCAA ATATGGTGAC GCTCCGGAAG TCATTATGAG TGGAAGACTA GATTTGACCT
TTCCTTATGT ACCAACTCAT TTGCGTAAGT AGAAGGAGAG TGGTAGGGAT GAGGATGGGG
ACAGGACTTT TGGTTATCCG CGAAATGTGA CAGGATACGG TTCATTTTTT CATCCGCCTA
ACGTAAATTC GCTGTGTTGT AGACTATATC ATGTTGGAAT TGATTAAAAA CAGTATGCGT
GCCACTGTGG AATGGCATGG TATTGATTCG CCGGAATTTC CGCCTATCAA GGTAATTATT
GCCGATGGTG CCGACAACGA GGACGTAGTG ATCAAGGTTA GTGACGAAGG TGGCGGAATT
CCCCGATCCA ATATGGGGAA GATTTGGTCC TATCTTTTCA CGACCGCGGA TCCAGCCATT
CAAGCGGGTA TGGTCGGAAC CGCTGGTGCC AAAGGACAGG GCCAAGATCA CGGAATTGAC
TCCCCTTTGG CTGGGCTGGG CTACGGGTTG CCGATTTCGA GATCGTACTG TCGATACTTT
GGTGGCGATT TAAGCATCAT GTCAATGGAA GGATTCGGGA CCGACGCTTT CGTGTACTTG
ACGCGATTGG GCAATACAAG TGAACCCGTG CCAATTTAGA CAAGAAATAT ACAGTCAGCA
TTGCAATTTC ATCGGGAGAG AAAGTGGCTG AAGTAACAGC TGTCATAGAG TCAGCTCGTT
TTGCTTTCGC CTATGTTTCT AGCAAAAAGA ACGCACAAAA ACAATTTACG TTCCAGCGAG
AATTCTTTTA CTTTGCTGTA AAAAGTAAAA AGAACTTTTG TGCTTGGT
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| Protein sequence | MEFGNVKPWK ALSVSTELVL IQVAGFLRRE LPIRLAHRIR DLEGIPLLKD MASIQLVRDL
YVKSFLELLS FDKLIQSAEQ EEGFAALIEN IYDRHSKVLV QMAQGAYEFR SAVRQEKGAD
GFELQEETHR FLDRFYLDRI GIRVLIGQYL ALRQPPVENY VGIICSHTSP YEIVKRAIDD
AAFMCTRKYG DAPEVIMSGR LDLTFPYVPT HLHYIMLELI KNSMRATVEW HGIDSPEFPP
IKVIIADGAD NEDVVIKVSD EGGGIPRSNM GKIWSYLFTT ADPAIQAGMV GTAGAKGQGQ
DHGIDSPLAG LGYGLPISRS YCRYFGGDLS IMSMEGFGTD AFVYLTRLGN TSEPVPI
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