Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50537 |
Symbol | |
ID | 7199375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | + |
Start bp | 49394 |
End bp | 54022 |
Gene Length | 4629 bp |
Protein Length | 879 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185477 |
Protein GI | 219130659 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.437528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAACGCTTC ATTCAACTGA TTGATTACCA ATCAACGATC CAAACATTGG GGTAGACAAT CTTCCGCTGC TGCTTTTTAC GATGACAAGA TGGGATAGCA ATCGACGTCA AGTGTCATCG ACGCTTTTGC TGTACTGCGC GGTATCGTGT GAGGCATTTT CCGGGTCGTT CTACACGCAC ACGCAGCCGT CCGCACCGAC ACGGCCATCC TTTGTCGGAA CGAGGAGTGC CGGTACACGT TTGTTTGCCA AGAAGAAGAA GTCTCCGGCA GCAATGGCTC TGGAAAAGCT GGACAATCTC TCCTTTTTGG ACGAGGAAGT ACCCTTGTCC AAAAAAGAAC AATTGCAACT GGAAAAGAAG CAACAGAAAT TGGTGAAACA GCAGCAGGAA CTGCAAGCCA TCGACGCTGT GGAAGACGAA TCTTCTGCTA AAATCAAGAC GCCGGTTGAA AAGCACGCCG CACAAGGCGA TAGTGTGGAG TTTCAGCCGT CACAACCAAA GAAATTGAGT AAAAAGGAAG AAATGTTACA AAAGGCGCTC GAGTTAGAAG CTGCCGATGA AGCCAGTGCG AACGCTATTT CTTCGGATTT TGACGAACCT CAGCTATCAA AAAAAGAACT CAAGGCCTTA CTGAAAAAGG AAGAGAAAAT GGCGGCCAAA CTTGAGAAGA AAATGGCCAA GAAACAGCAA GTCGTAGACA ATGACGAGCG TGACGAGAGT CTGACTGCAA CAGATGCAAC GGTCGACGAT GAAATTTCGG TAAACATGGA TGTAAACGAA GTCTTCAATG GTGAAGAGAC AGATGAGGAA GCCCCGAAAA TTAGGTTGAG TTTGGAGGAC AAGATTCGCA AAGAACGACC GCCGCCAAGA ATTCGTGTCA TGGAAAGCTC ACAGCCTGGT TACCAGTCTC TCCGCCTCGA AGATATCGGA ATTACCTTTC GCAACCAAGA AGTCTTGAAA GACGTGACTT GGGGTGTGCA AACTGGGGAT CGAATTGGAC TGGTCGGGGC GAATGGTGCT GGGAAAACGA CACAGCTACG CATTTTGGCT GGCGAACTAG AACCTACGAC CGGGGACGTC GTCAAGTCGA GCAAGGATTT GCGAGTCGCC ATGCTCCGAC AAGAATTTAT CGATGAGCTG GTTCCGGAAC GCACCTTGCG AGAAGAGTTT CTGAGCATTT TTGGAGTAGA AAATCAAATT CTGGAGGATC TCAAGAGTTC GGAACAGGAA CTCGAGAGCA CCCCGCCGGA AAATTCCGAA AAAATGCAAG AAATTCTGGA TCGTATGCAG GAACTCCAAA ATAAGGCAGA AAACAAGGCT GTTTATGCGC TGGAGTCTCG TGTGCAGAAA GTTATGGACT TGATGGGTTT CACGGATGAT GAAACGGAAG ATCTGGTTGC TAGCTTTTCT GGTGGCTGGA AAATGCGCAT TGGACTCGGC AAAGTTTTGC TTAAAGATCC AAATATCTTA CTGCTTGATG AACCTACCAA TCATTTAGAT CTGGATAGTG TGGAATGGTT GGAATCGTTC CTGCGTCAGC AAAATATTCC CATGGTGATT GTAAGCCACG ATCGCGAGTT TTTGGATCAA GTCTGCACCA AAATCGTCGA CGCTGAAGGT GGTATCTGTA CCGAGTATGA GGGCAACTAC TCGCGATTCC TGCAGCTGAA GAAAGCCCGT ATGGACGCCT GGCAGGCGGC GTACGATGCT CAGGAAAAGA AAATCAAAGA AGAGCGCAAG TGGATTCAAA AATTCAAAGT AAAACAACCG CAGGCTGTAA AGCAGCGCCA AGCCAAGCTT GAAAAACAAA TCAAGAGTGA CGACTATGTC AAGAAGCCTC CATTTGTCGG CAAACCTTTC CGGTTTCGTT TTCCGGACGC ACCTCGTCTA AGTCCAGAGG TAGCCAATGT CAAACATTTG TCTCACGCAT ATCGTAACGA ACAAGCTCAG AATCGTTTGT TTGAAGATTG TGAGCTCTTT ATTGAGAAGG GCGATCGGAT CGCTGTACTC GGGCCCAATG GTTCGGGCAA GTCGACACTT TTGCGATTGT TGGTTGGTCG AGAGAAGCCC GACGATGGGA GTGCCGAAAT CATAGGACAA AATGTGATAA TGAACTATTT TGAACAGAAT CAAGCGGACG CACTTGATCT CGACAAAACT GTGTTGGAGA CAATACAAGG CAACAGCAGT GGTCAGTCCT ACAACGAACT CCGAGCGCTA CTAGGACAAT TTCTGTTCAA GGGAGATGCA GTCGACAAGA AGATTGAATT CTTGAGTGGA GGAGAAAAGG CACGGCTTTC TTTATGTTGT ATGATGCTTC GACCGGCCAA CTTGTTGATT TTGGACGAAC CGACCAATCA TTTGGATATT CCGGCGAAAG AGATGCTTGA GGAAGCTCTG CAACACTTTA TGGGTTCAAT CATGGTTGTA TCCCACGATC GTTACTTTAT TTCCAAGGTC GCTACTTCCA TTGTAGCGAT TGAAGATCGC AAGCTGGCCA AGTATCAGGG CGATTACAAG TTTTACATGG AGAAGAGCAC GCACATCAAG GAAAAAGTGG AAGCCCGGTA CGTCAGTGGT GTAGATCGTA TCGAATCGGC ACCCATTATT GATCTGGAAG AAATCGTCAA GCCGAAAAAG AATTTTGGTG GAGCCAAAAC AGCCGGCTTG GTAACGAGAA AAGACAAGGG TATCAAGAAT GCTAAGCGAA TGAAAACTTA AACTGCACTA ATAGAATCCC AACCATTGCT GTGGATGAAA GTATGGACTT GGCTATGATT AGTTGAAAGA CTCGAAAAGA GAGTTTTTGC AGCAGCTTCT AAGGGTTGAT TGAAGTAGGT TTTGTGGGTT CGATGCTTGT CGATTGTTTC CAGTTATACT TACGCACGAA CAGGCAAGCG TTCGAGCGCG ACTTTACTGT CCCATCCATG CGGTTGTTCG AAAGTTTTCT CCCGGGAAAG TCACCTTGCC TGCTTCCAGT TCGGCCTCGA TACGCAAGAG TTGATTGTAT TTGGCCAAAC GTTCCGATCG GCAGGGCGCG CCCGTCTTGA TCTGTCCCGT GCACAATCCG ACGGCTAAAT CAGCAATGTA GGTATCTTCG GTTTCGCCGG AACGGTGAGA CGTCATAACA CCCCAACCTG CTTTTTTCGC CTTGGTCACG GCAGCGATGG ATTCGGAAAT GGAACCGATT TGGTTTACCT TGAGCAACAA GCACGTGCAG GCCTTTTCGT CAATGGCACG TTCAATCTTT TCAATGTTAG TGACGGTCAA ATCGTCACCA ACCACTTGGA AGGTGGCACC ATTCTTGGTT GTAAATTTGG ACCAGTTCTC CCAGTCGTCT TCGTCAAAGG GGTCTTCGAT GGTGACGATG GGAAAGTCGG CTGCCAGCGA CTGGTATAAA TTACCGAGTT CTTCTCCAGA TACAATGTCA CCATCGTACT TGAAGTCCAA ATCGTATTCA TCTTTGCCCT TGACTTTAAA CTCGCTCGCG GCAACATCGA GACCAATCTT GCATTTACCA TCGTATCCGG CCTTGGAAAT TGCTTCCATG ATGAGTTCAC AGCCTTCGCG GTTGTCACAT GGCGGAGCGA ATCCACCTTC GTCGCCAATC AGAGTCGCGT CGCCACCAAA CTTGGCCTTG ATGATTTTCC CCAAGGTATG GTACACTTCG CAACCAATCT GCATGGCTTC GGCAAATGAT TTGGCACCCG TCGGGATAAC GAAATATTCC TGAAAGGCGA GTTTGTTCCC CGCATGGGAG CCTCCATTAA TAACGTTGAA GCAGGGGACG GGCATAGTGT AGGTGTCCAG ATTGTTGCCG GCTAGATCGG CAAAATGCCG ATAAAGGGGG ACTTTCTTCG CGGCGGCTCC GGCTTTGGCA ACGGCAAGGC TGACCCCCAA AATGGCGTTG GCCCCGAGGT TGGCCTTGTT GGGTGTTCCG TCAAGTTCCA GCATGACGTC GTCGACGGAT CCCTGTCCGA CCGGATCCAT ACCCATGACG GCTGGTCCGA GTATGTCGTT GACGTTCTGT ACGGCCTGGA GGACACCCTT GCCCATGTAG CGGTCGCCGC CATCGCGCAG CTCGACAGCT TCGTAGGCAC CGGTGGAAGC CCCGGACGGT ACCGACGCGC GGAAGACTCC GTCGGCGGTC GTCACTTCGA CCTCCACGGT AGGATTGCCG CGGGAATCCA AAATCTCACG GGCGAGAACG CCCGTGATGC CGGACATGGC GAGTGTAGTG ACGGAGGACG AAGCCGAACC CCGCGTGGTA CTTGTCAAAG AAGTCGTCGT CGACCGTGGA GCAAAGGCTA GCGTGGTGCC TGTAAAGTAG ACAAACGTGG TGAGTGAGAA CAGTGTCTGT AGGGCAAGCC GTCGTTCCGA TAGACAAGAA GATGTCGTTT GATTCGATGA GAATAACCAC CGTTCGGATC GTTGGTGCTA TCCGATCCAC ATGGAACGAC TCCATCGGCG CTGCGGCTTT TCGACGCGTC CGTTATGCAT ACCGACAGTA GCGAATCTCC AGGCAAAAAC AGGAGTCGTC ACGTACCAGC AACCGCAAAG AGAGCCAAGA GAGTCGAAGG CTTGAAAAGC ATGACAACGG TGAAGATCTG CAAAAGTCAA ATGTATCCG
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Protein sequence | MTRWDSNRRQ VSSTLLLYCA VSCEAFSGSF YTHTQPSAPT RPSFVGTRSA GTRLFAKKKK SPAAMALEKL DNLSFLDEEV PLSKKEQLQL EKKQQKLVKQ QQELQAIDAV EDESSAKIKT PVEKHAAQGD SVEFQPSQPK KLSKKEEMLQ KALELEAADE ASANAISSDF DEPQLSKKEL KALLKKEEKM AAKLEKKMAK KQQVVDNDER DESLTATDAT VDDEISVNMD VNEVFNGEET DEEAPKIRLS LEDKIRKERP PPRIRVMESS QPGYQSLRLE DIGITFRNQE VLKDVTWGVQ TGDRIGLVGA NGAGKTTQLR ILAGELEPTT GDVVKSSKDL RVAMLRQEFI DELVPERTLR EEFLSIFGVE NQILEDLKSS EQELESTPPE NSEKMQEILD RMQELQNKAE NKAVYALESR VQKVMDLMGF TDDETEDLVA SFSGGWKMRI GLGKVLLKDP NILLLDEPTN HLDLDSVEWL ESFLRQQNIP MVIVSHDREF LDQVCTKIVD AEGGICTEYE GNYSRFLQLK KARMDAWQAA YDAQEKKIKE ERKWIQKFKV KQPQAVKQRQ AKLEKQIKSD DYVKKPPFVG KPFRFRFPDA PRLSPEVANV KHLSHAYRNE QAQNRLFEDC ELFIEKGDRI AVLGPNGSGK STLLRLLVGR EKPDDGSAEI IGQNVIMNYF EQNQADALDL DKTVLETIQG NSSGQSYNEL RALLGQFLFK GDAVDKKIEF LSGGEKARLS LCCMMLRPAN LLILDEPTNH LDIPAKEMLE EALQHFMGSI MVVSHDRYFI SKVATSIVAI EDRKLAKYQG DYKFYMEKST HIKEKVEARY VSGVDRIESA PIIDLEEIVK PKKNFGGAKT AGLVTRKDKG IKNAKRMKT
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