| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50058 |
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| Symbol | |
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| ID | 7198805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011694 |
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| Strand | - |
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| Start bp | 270049 |
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| End bp | 273987 |
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| Gene Length | 3939 bp |
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| Protein Length | 1312 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184934 |
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| Protein GI | 219129518 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTAT TTCCCAAATC CTTCCTGGCG CACACACCAC GGATTCGTGG GAAGACGGTG
CGTACCACCT ATAGGAGCCC TCTCCAACTT TTGCACATTC GACAACGCTC AATCACCCAA
GCGACTGATT CATCCATTAC CATCGCAGGG GTAACGATTG AACAACCACC TGGCGGCAGC
GGTCGGGACG ATCTGATACC ACCCTTCGAT GCTACTTCGT CCCGTTTCGT GCAGAGCTTG
CCGCCGTCCT ACGTCTCCAC GTTAAGATGG ATGCTGCAAA AGGATTTAGT CATGAAACAG
GATTTCTGTT TACTGGGACA TTCTGCTGCC GATCAACGAC TTTTGGCACT GACGTACGCC
GCCTTGACTT CTCGAGAGAT AGAATATGTT TCCCTGACTC GTGATACTTC GGACGCGGAC
CTTAAACAAA GAAAGGAAAT GCGCAACCCT TCCGACCCTC TGTCGTCGGC AACATCCAGC
GTGTCTTCCA TTTACGTTCC GCAGGCGCCG GTACGCGCCG CATTGCACGG GCGCCTGCTG
ATTCTGGATG GCATCGAAAA GGCGGAACGC AACGTTCTCC CGACACTCAA CAATCTGCTC
GAAAACCGGG AACTCTCTCT GGATGATGGG TCCATGCTGG TCTCAAGTGC AACGTACGAT
CAGCACCGCG AATTCCAACA TGATGACGTA CTCAATAGAA TGCATCGAGT GCACGAGGAT
TTTACTGTCT TGGCCCTGGG TTCCCTGTCG GACTCGTCTG GTTTGGATCC CCCGCTACGA
TCGCGATTCC AAGCTCACGT GGCGCCTGCA TTACCTCCTG GAGAAATGCT CGACGCGTTG
GCATCTTTCG TTGATGCGGA TCGAGTCTCC ATGGAGCAAT TGCATACACT GGTACAGTCA
CCACTGGTTT CTTCGACCCG AGAAGCTTCC TATTCTGTCG CTATCAAGGC GGCCAAATTT
CTTCAAGCGA ACTCTTTCAT GTCGGTTTCA TCGGTAGTGC GGGGGTTTGG AATTGGGACA
CCAATGACAG CGATGGACTG GAAAGCCGCC AAAGGGCAGA GCACGCATCG GACCTTGGAT
CGAACAAAGG TCCCGTCATC CTTTATTCCA ACCCATTCCA CAACAGCTAT CACCGAACTT
GTTCAAGCTG GTCTCGGAGT TGGGTGTGCG GTTGCATTGG TTGGTCCCAA GGGTAGCGGC
AAGTCCGCAC TGATTCATGC AGCTTCTCGA GCACTTAATC AGCCATACGA ACTCTTTGCG
GTCGTGCCAG ATATGACATC CCGCGATTTG TTGCTCCGAC GCGCGACCGA CGATGCAGGA
AACACAATTT GGAGAATGAC GCCCTTGGCC CGAGCTGTTC AGAATGGTTC CTGGGTTGTC
TTGGATGGTA TTGATAGGTT AAATTCGGAT ACCTTGACGA GTTTGGCGAG ACTTTTTGAA
ACTGGTCAGG TTGACATGCC AGACGGATCA CGATTGACCG CACATAAAGG ATTTGGCTGT
ATTGCTCTCG CCCATCCACC AGCTGCAGGA AAGTCTTGGA TTAATCCTGA AATTGCCAGC
ATGTTTTGTT GGGTTGGTGT TGATCCAATG GATGCCGGTG AACTCGCAAT TGTACTGAAC
GGTCTTTTTC CAGATATTGA GGAGAGAGAA CTCGACAAGC TGGTTCGCCT ACGCGACCGC
TTGGATGCTG CGGTCAAGAG CGGTGCGGCA GATACGGTCG AGGAACGGGA AAGCTTGACT
CTGTCTCTGA GAAAGATGAA GCACATTTGT CGCAGACTCC AGCGTGACGG CCGCCACTTG
TCTAAGTTGG TAAAGGACAC GTTATTGACT AGTCTGATGC CGGAGCGAGA GCGCCAAGTG
GTCCAAAGTT GCTTGCATGA TTGCGGCATC TTTGAATACA AGGCCGGCGA TCGTTTCGAA
AAAGACATTG AAATCGACCG CAAACTAATA GATTCTTGTC GGCGGACTCC CGAGAATCCA
ATTCTTGTAC CAAATCCCAG GTTTCAAGAA AACCCAGGCC ATGCTCGAAT TCTTGGCAAC
ATTCTCGAGG CTCACGCCGT CGGCGAACGG GCGCTTCTTA TCATGGGCTA TCAAGGAGTT
GGAAAGAACA AAGTTGTAGA TTTTTTGCTC CATCGGCTAC AGCGTGAACG TGAATACCTA
CAGCTGCATC GCGACACTAC AGTTCAGTCT GTTTTATCAG TCGCGTCTGT GGAAAAAGGA
CGAGTTATAT ATGCGGACTC TCCATTAGTT AGAGCAGCGA CGCATGGGCG AATCCTGGTC
ATTGATGAAG CTGACAAGGC TCCTGTAGAC GTTGTTGCTT TGCTCAAAGG TCTTATTGAA
GACGGCGAGC TAGCTCTTCC CGACGGAAGG GTCCTACGGT ATGACGATGA CGGTCGATCG
AATACTCTGG CAGTCCATGC AGACTTTCGG ATTTGGGCTT TGGCCAATCC TGCGGGATAT
CCATTTCACG GTAATAATCT CGCTCGCGAA ATGTCTGACG TGTTTTCGTG CCACACCGTC
CCGCCATTGG ACAGTGAAAG TCAAATGCAG ATTCTCCGCA GCTACGCCCC TAATATCAAG
AAGAAAAAGC TGTCAAAAAT TATCTCTCTT TGGCAGGATC TCGGTGAAGC GCACGCGAAA
GGAACTCTTG TGTATCCCTT TGGTATCCGT GAAGCCGTGT CTGCCGCTCG TCACATGAAC
GAGTTTCCTA ACGATGGGCT GACTGGAGCC ATTGAGAACG TAATTGCTTT CGATCGTTCG
GATCTTGCTC TCATGAAGCA GCTAAATTCT ATATTTCGAA AACATGGGAT TGAACTCTCG
TCTTCTGAGC CGATGAATGA AAAACAACGA ACTGAAGGTG GAATCTCAAC ACCAAGAACC
CGAGTTGGCG ACCCGAAGCA CGGCAAAGTA GACCCAGATA ATACTCCACA TATTGGAGGC
AACACCTGGT ACGGTGGTAC CGGCGGTTCG GACACTGCCG GACTGGGCGG TAGAGGCGGA
CCGTATCGCG TAGACCTGGG GCACCCTGTC CACCAAGTAT CAGACGAAAT GAAAGCCCAA
GTATCAGATG AAGCTCAGCA CAGAGCACGA GAAATAGCTG CTATAGAACT AGAAAAGAAA
TTGCGGGAAC TGAGCATGGG AAAGTACGAT TGGGAAAGAT ACAAAGGGCT CCGGGAGCGC
GTTGCCCTAC AGATTGAGCA GTTACGAGTT CATTTAAAAG ACTTGCAACA TCGTATGGAA
GAGCGAATGT GGTTAAACCG ACAATTTTCC GGAGAATTGG ACGAATCGCG ATTGGTAGAT
GCACTTGCGG GTGAAAAAGA TGTATTCAAA CGACGCGGAA CAGCAGTTGA TTCAAAGGTA
TCCTCCAAAC TATCATCTGA TAAAATGCGA ATAAAGGTCG TTGTAGACGT TTCCGCTTCG
ATGTATCGAT TTAATGGCTA CGATGGTCGA CTTGAGCGGT TATTAGAGGC AACCCTGATG
ATCATGGAAG CGCTACGGAG CGATGATCGC TTCCGGCTTG AAATTGTGGG GCACAACGGG
TCAAGTGCTG TAATCCCACT ACTAAAAGAC GACTCTTCGC TAGACGAAGC CACACAACTC
CGAATTCTGC AAGGTATGAT TGCTCACACT CAGTACACGT ACGCTGGTGA CAGCACTTTG
GAAGCCATTC AAAGTGCCAT GGAGAAAGCT CGCCCGAAAG ACTTGGTGTT AATGATCTCG
GACGCCAACC TGGAGCGCTA CCGGATTGAG CCCATACAAG TTGTAAAATT GTTGCAAAAG
CCGGAAGTTC ACGCTCATTT AATTTTGATC AGTTCTTTTG GAGAGGAAGC GTACGAGCTT
GCAAATGCTG TTCCAAACGG ACGAGCCCAA GTCTGTCTAG ACAGCAGCGA GCTCCCTCTA
ATATTGAAGA AGATCATCGT GGCTTCTGCT GATCTTTGA
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| Protein sequence | MSLFPKSFLA HTPRIRGKTV RTTYRSPLQL LHIRQRSITQ ATDSSITIAG VTIEQPPGGS
GRDDLIPPFD ATSSRFVQSL PPSYVSTLRW MLQKDLVMKQ DFCLLGHSAA DQRLLALTYA
ALTSREIEYV SLTRDTSDAD LKQRKEMRNP SDPLSSATSS VSSIYVPQAP VRAALHGRLL
ILDGIEKAER NVLPTLNNLL ENRELSLDDG SMLVSSATYD QHREFQHDDV LNRMHRVHED
FTVLALGSLS DSSGLDPPLR SRFQAHVAPA LPPGEMLDAL ASFVDADRVS MEQLHTLVQS
PLVSSTREAS YSVAIKAAKF LQANSFMSVS SVVRGFGIGT PMTAMDWKAA KGQSTHRTLD
RTKVPSSFIP THSTTAITEL VQAGLGVGCA VALVGPKGSG KSALIHAASR ALNQPYELFA
VVPDMTSRDL LLRRATDDAG NTIWRMTPLA RAVQNGSWVV LDGIDRLNSD TLTSLARLFE
TGQVDMPDGS RLTAHKGFGC IALAHPPAAG KSWINPEIAS MFCWVGVDPM DAGELAIVLN
GLFPDIEERE LDKLVRLRDR LDAAVKSGAA DTVEERESLT LSLRKMKHIC RRLQRDGRHL
SKLVKDTLLT SLMPERERQV VQSCLHDCGI FEYKAGDRFE KDIEIDRKLI DSCRRTPENP
ILVPNPRFQE NPGHARILGN ILEAHAVGER ALLIMGYQGV GKNKVVDFLL HRLQREREYL
QLHRDTTVQS VLSVASVEKG RVIYADSPLV RAATHGRILV IDEADKAPVD VVALLKGLIE
DGELALPDGR VLRYDDDGRS NTLAVHADFR IWALANPAGY PFHGNNLARE MSDVFSCHTV
PPLDSESQMQ ILRSYAPNIK KKKLSKIISL WQDLGEAHAK GTLVYPFGIR EAVSAARHMN
EFPNDGLTGA IENVIAFDRS DLALMKQLNS IFRKHGIELS SSEPMNEKQR TEGGISTPRT
RVGDPKHGKV DPDNTPHIGG NTWYGGTGGS DTAGLGGRGG PYRVDLGHPV HQVSDEMKAQ
VSDEAQHRAR EIAAIELEKK LRELSMGKYD WERYKGLRER VALQIEQLRV HLKDLQHRME
ERMWLNRQFS GELDESRLVD ALAGEKDVFK RRGTAVDSKV SSKLSSDKMR IKVVVDVSAS
MYRFNGYDGR LERLLEATLM IMEALRSDDR FRLEIVGHNG SSAVIPLLKD DSSLDEATQL
RILQGMIAHT QYTYAGDSTL EAIQSAMEKA RPKDLVLMIS DANLERYRIE PIQVVKLLQK
PEVHAHLILI SSFGEEAYEL ANAVPNGRAQ VCLDSSELPL ILKKIIVASA DL
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