| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50014 |
|---|
| Symbol | |
|---|
| ID | 7198714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011694 |
|---|
| Strand | - |
|---|
| Start bp | 143908 |
|---|
| End bp | 144912 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184900 |
|---|
| Protein GI | 219129447 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00310669 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATAAGGGTG TTTGGTGGTC TTTCGGTTGG AGTGCATCGT TCGGAGTGTT GTGCTTGTAG
AACTTTCTAT TTTTGGTCGC CACCAAAACA CGAAAAAGGC TCCGCAACAG TTTTCTTACG
CAACACTAGT ATTACTTGTG GAAGGATGAG TGGCGTGCGC TTGGTATGGC GCTCGTCGTT
GCTTCGTCAA CGCTCCGTCC GGACGCTTCC GAACCTTGCC ACCCGCACGT TCGCTTTTGG
TAGTCGTGGA TCACGGGGAC ACGGCTGGTA CATAAAGTAC CGTGAGGGAC GTGGAGGAAG
GCATTTGCAG GGTGAATACT TCGATCGGGA CAGTACCGAA GAACAGATCG CGTGGAATGC
GTCCGTCATG GATTTGGGTT CCCAGACACT CTACATGGAC GTGGTGGTGG AACCCAAGAC
GGCGCAGTTT GATTCTCCGA GATACGTACC CGACTTGCAA ACACTCCGAG GCGAAAAGCA
TCGATTGACG ATGCGAATTG CCTCGACTGT TTTGGCACAA ACGAGTCGGA ACTTTGTTGA
TCTGCTGACT CGCTACGTTG GAACCCGCTT TTACCGCATC GAACCAGGCG TGGGACTCTT
TGGCGGTGAC GTCCTCACCA ATACGGGAAA GACGGGACAA GCCGCAAACG GCCTGCCGTT
GACCATCAAC GTCGAGAAGG ATCCACTCGC GCTTTGGCAC GTCCCGGGTA CCATTTCCAT
GGTGGTCCCC CTGGTTGGGG ACATCGACAG TCGCTTCATC TTGTGCACAC ATTCAGCACC
GCACATGGAC GGAATTCATC GGCCCTTTGG TACACTAACG GGCGATTGTC TCTCTACCGT
ACAAGCTTGG GAATCCAAAT TGTTGACCAA GAAGGGCGTC CCGTCGTCCT TTGATCTTAT
TGTCGTTGAA TGTGGACTCC TCGAGGACGA AGCGAAAACA CCGGAACCAG CCATCGCATA
AGCTTCCTAC TATACTAACT ATTTTTAGTT CAGATTGATT CGCTC
|
|---|
| Protein sequence | MSGVRLVWRS SLLRQRSVRT LPNLATRTFA FGSRGSRGHG WYIKYREGRG GRHLQGEYFD
RDSTEEQIAW NASVMDLGSQ TLYMDVVVEP KTAQFDSPRY VPDLQTLRGE KHRLTMRIAS
TVLAQTSRNF VDLLTRYVGT RFYRIEPGVG LFGGDVLTNT GKTGQAANGL PLTINVEKDP
LALWHVPGTI SMVVPLVGDI DSRFILCTHS APHMDGIHRP FGTLTGDCLS TVQAWESKLL
TKKGVPSSFD LIVVECGLLE DEAKTPEPAI A
|
|---|
| |