| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49176 |
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| Symbol | |
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| ID | 7195667 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | - |
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| Start bp | 129996 |
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| End bp | 133982 |
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| Gene Length | 3987 bp |
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| Protein Length | 869 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183932 |
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| Protein GI | 219127417 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.450709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCCGG TCGTTGTTAC CACGGCGTGT GGTTGTTTCG CACCGCTCCT GGACTCTCCC
CCCAAACAAT CCACCCAGTT CTTGTACGAG TACCCCAACA CGTCCTTCGA CAACAACTAC
AACAACAGCA TCAACGTTAG CACTAGCAAT ACTAGCGACC GTGACGGGAC TACCGACATT
GACCGCAACA GGGAATGCGC AGCCGACGAC CAACTTGGGG ACGACGCATC GCACGAATAC
CCGTACGGGA ACGTTCCACA CTTCCGCAAC GACAATAGCA GTAGCAACGA CGAACACGAC
GACGACAGTA GCAACGGTAC GACGACGAGT CCGCGAATGG GTCGTCGGCG TCGCAAGGGC
ATGAACTTTT TCGCTTCCAA AAAGTCTCGC GCCGCTGCCG CGGCCGCCGC GGCGGTGGAA
ACGGCTCCGG CCGACACGTC CAGCTTTCGA CCGGCCGTCA AGGCCGTCTT GGAACCATTC
ACGTCCAAAA GTAGTGTCGG ATCTCCGCGT GCCGATTCTG TCGTCGCCAA GGAAAACCCG
CTGCCTCGCA ACCACGACAC TAGTCAACCT CAACACACTG AGGATAGTAA GAAGGAGAAG
GATGGCGGCA GTACCAGTCC AAGCAACGGC ACCAACCACA ACAATGGTAA CTCCGGTACG
CACCCGAACG ACAGTAACAA CAACAACAAC AACCAGAACA AGAACAGCGA ACCGTCGTCT
CCCGTGTCAT CCGACGAACA ACGCGATCAC CATGACGACA CTCATAGCAA CCACAACGAC
CACAGCAACA GCAACGACGA CGACAGCAGT ATCATTTCTA TTCACAATCA CGACAGGATC
GACAATTCAC CCAAACGGCG AGAAGAAACT ACCGAACGCG TCACCACCAC CACCACCGAA
GACGACGACG ACAATGACAA CAACGAGCCG GGAGAGGACG ACAATAGTAT CCTTGGTATC
CGCGACGACA GTTCCTCCAC GACGAACCCA GCCCACTCTC CCATTCAGCG TCACGTTGCC
ACACCAGAAG AAAACACAAG CAGCACGAAC AGCTCCGTCA TCCTCGAACC CTCCTCAGCT
CTGCTCGACA ATCCACACAC CGCACTCCAC ACAACTCCCC ATCGCATCGA CAGCAGCGAC
TCGGAACCCC GTCTGTTCCG GACGTTCACG CCCGGTGGAT CCACCACGGA CATTCCCGCC
GTCGAAACCG CCGTATCCGA TCTCGGCGAC GTCTCGGAAG TTCCCCACGG GGGTCTTCCA
GCCCGACAAC CAAGCGGGCC CTTGCGGACG AAGCTCCAGT TGGACCTGCA TACCGATCTG
CTGAAGCGAT TGCGAAACAC CAACCGCATG CCGGAATACA TTCTCGCTAC GGAATCGTCG
CGACCCAGCG AATCGCCCCC GCGACCCAGC ACCCCCACCG AGGCCATGTC GACGACAACC
TCCCACGTGT CGGAACCCTC GTTGACCCCG GAAACGCCCG TGCAAGCCTC CCCCCTCGCC
GTGGAAACAG ATTCGAGTCC GGCAGAATCT TCCCGAACGG TACCGGAGAC GCCCGATTCG
TCCCCACGGA CACCCGTATC ACCGACAGCA ACGACATCCT CGGACGACAC ACCGTGCAGC
CCAACAACGA CGCACTCTTG CGTATCGGAA TCCCATGATC TCCCCGAATC GTCACCGGCG
GTACCGAACA CCGCTGCCGG AGTCGCCACC GAAGCCAGCG GACCTTCCTC GAGTCCAGAA
GCGTCTTTAA CAGTATCCCC GGAATCGTCA AGCGTGCCTA GACCGCCGTT CCCGACACAA
ACAACCGCCA CCTTGTTGGC TGAAGAAGCA CCCCAGAGCC CGGCAGAATC TTTCCAAACG
GTACCGGATA CGCCCGATTC GTCCCCACGG CCACCCGTCT CACCGGCAGC AACGACATCC
TCGGACGACA CACCGTGCAG CCCAACAACG ACCACCACGA CCGGCTCGGA CACGGCTGAA
GAACTATCTC CTGCTCCGGA AAGACTTCCC GTACCCAAAC AGCTACTGAC GGTGCCGGAC
GCAGCCACCA TCTCCGCAGC AGCCGAAGAA ACATTCTCGA CTCCGGAATC GTCTCCAAAA
GCGGTACCGG AAACGACCGA CTCATCTTCA GTGCCATTGT CGACAGAATC AGAGACAAAT
ACATCAGTGG GAGAGCTGCT GTCGAGTCCG GCAGCAAAGT CCTCGACAGC CTTGTCGGAC
GGAGTTAGCC AATCGGCTGC ACAAATAGTC CTGCAAGCAT CCACATTTAC AGAAGAAAGA
CCTTCGAGAC CTGTGGCGGA GTCGGAGCCG ACCAGTGTAT TGGCAGCGCC TTTGACGATT
CTGGAAACTA GCCCATCATC AGGTAATTCA TGCTCGAGTC CGTTAGAGTC GCCCGAAAAA
GACTCAAAAA CGCCCAGCAT AGATGTACCG CCTTCGAAAC CCGCACCAGA AATTACCGTA
TCCGTCGGGG TGACACCCTT GGTATCCCTA ATGGGGTGTG AGGCAACGCC CAACGTACTT
GTTCGGCCGT TGGAAACATT ACGAGAAAGC ACTCCGTTAG TAGTGAAATT GCCTTTGAGT
CCAGCCGAGT CGTCAACGTC GGACGCGGAA ACACCGATGG CAAAATCGTC ATCGCCTCTT
CCGAAAACAG CCAATTCAGC CGGAGCAGCG GCTTCTTGCC CAGTGGAATC CCTAGTGGCG
GCCTCCGAAA CTCTAAAAGG TGCTGCAATA CCCTTGAAAG TACCGGAAAC AGCCATAGTA
GCAGGAGAAA TCCTCACTTT TCCGGCAGAG TCGTCGATAG GAGTACCGGA AACGCATGAT
GCATCTGCGC CTGCGCCAGT AATGCCGGAA TCTCCAAAAT CATCCGAAGA CACGCCCTCT
AGATCCCCAC CAATAATACC TGTATCGGAA ACGCCCCATG GAGGGGCAAT CAATGAGAGG
CCGGTAGTGT GTCCAGTAGA ATCGGAAGCC ACCACCTTAA CTGGAGAAAC GTCCCTAAAA
CCGACGGTTA TCCTCACGGC ATCAACAGAC GAGTTGTCTT CTCCGAAAGA ACCGGAACGA
TCTTCATCAG ACAGAGAAAC ACCATCGAGT CCATTGCAGA GTGTGACATG CCAGGAAAGG
AGCGGGTCCC AAGGAACTTC TCCCGCTTCA GACTCCGTAA AACCATCTCT CATGCAAACC
CCGCCATCCG ATACTCATTC GTATCCACAA AATGGAGGAT TGACACCCTC TCAAACAATT
GCAAGCGCTA TCAACACCCC AATCGTATCA GAAACCATAT CGCCCCCCAA GTCCGATACA
GTGGCTGCTA CATTAGCATC GGGTTTGTCC ACGCTTTTAT CCACCAAGCA GTTCAAGCCT
CCGTCAATAT CTCAGGTTAT TCGCAAGGAT TTATGGAGTT CGGAAACCGG TGTTGTGTTT
GAAGCACTTC AATGGATTAC AATCGAAGCC TTCCACGACG AAGGAGCCCG GGATACAATT
GCTCGGACCG GTGGCCTGCT GGCCATTGTG CGGGCTATGG AGACGCATTC TTCGCACGCA
CCGATTCAAA AAGCTGCTTG CCAGGCTTTA GAAAAGCTTG CATTGGATAT CGAGAACGAA
CGCGCCATCA GCGATGTTGG CGGAGTTGAA GCAATTCTAG CGGCCATGAT GGGTCATTTG
AACAACGTAT CAGTTCAGGA GGCGGCCTGG TCGGCCCTGC AAAATTTAAC ATGTGGGAAC
GCCCAGGGGG CCATGACAAT TGACACTACG GGTGGCATGG TCTCGTTGGT CTCTGCAATG
CGAACGCATT CTACCGAGCC ACGAGTACAA GCGAGCGCGT GCGGGACCTT CGCCAATTTA
TGTCTGGATC ACGAAGATCG TTTAACGGCG TTGGCGCAAG CGGGCGGCTT TAGCGCCATG
GCGGATGCCC TACAACTCCA TTGGGAAAAT ATGGAAGTAC GAAAGGAAGC AAGTCGAGCG
CTGGCGGATT TGTTGGAAGA TGTTTAA
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| Protein sequence | MLPVVVTTAC GCFAPLLDSP PKQSTQFLYE YPNTSFDNNY NNSINVSTSN TSDRDGTTDI
DRNRECAADD QLGDDASHEY PYGNVPHFRN DNSSSNDEHD DDSSNGTTTS PRMGRRRRKG
MNFFASKKSR AAAAAAAAVE TAPADTSSFR PAVKAVLEPF TSKSSVGSPR ADSVVAKENP
LPRNHDTSQP QHTEDSKKEK DGGSTSPSNG TNHNNGNSGT HPNDSNNNNN NQNKNSEPSS
PVSSDEQRDH HDDTHSNHND HSNSNDDDSS IISIHNHDRI DNSPKRREET TERVTTTTTE
DDDDNDNNEP GEDDNSILGI RDDSSSTTNP AHSPIQRHVA TPEENTSSTN SSVILEPSSA
LLDNPHTALH TTPHRIDSSD SEPRLFRTFT PGGSTTDIPA VETAVSDLGD VSEVPHGGLP
ARQPSGPLRT KLQLDLHTDL LKRLRNTNRM PEYILATESS RPSESPPRPS TPTEAMSTTT
SHVSEPSLTP ETPVQASPLA VETDSSPAES SRTVPETPDS SPRTPVSPTA TTSSDDTPCS
PTTTHSCVSE SHDLPESSPA VPNTAAGVAT EASGPSSSPE ASLTVSPESS SVPRPPFPTQ
TTATLLAEEA PQSPAESFQT VPDTPDSSPR PPVSPAATTS SDDTPCSPTT TTTTGSDTAE
ELSPAPERLP DLWSSETGVV FEALQWITIE AFHDEGARDT IARTGGLLAI VRAMETHSSH
APIQKAACQA LEKLALDIEN ERAISDVGGV EAILAAMMGH LNNVSVQEAA WSALQNLTCG
NAQGAMTIDT TGGMVSLVSA MRTHSTEPRV QASACGTFAN LCLDHEDRLT ALAQAGGFSA
MADALQLHWE NMEVRKEASR ALADLLEDV
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