Gene PHATRDRAFT_49073 details

Gene Information

• Locus tag: PHATRDRAFT_49073
• ID: 7195315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 504706
• End bp: 506774
• Gene Length: 2069 bp
• Protein Length: 647 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183762
• Protein GI: 219127060

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0691142
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTCAAGTCTA CCAACCAGTC ACTGTGGTGT GCCAATAATT AGTGAAAGGA TACAAAAGCA 
TTTTTGCTTA CTAGTTTCAA GCGGGAGACT TTCGATCTCG AACGATTTGT TCTTCAGGAT 
TTTCTATGAC TAGAACAGCA CCCCCATCGC CATTTTTCCG GCCTTCGACT CCTCATGTCG 
TCGTGGTACG CCAAAGCCCG GGTGGGACCC GAACTACCGT ATCACAAAAA GAAGTTCACG 
AGCATAAGAG TACAATGCTC GGTTGTACCG CAAATCTAGT AAATGCAATT GTTGGAAGCG 
GTATTGTCGG TATTCCATAT GCGATTCAAC AAGCTGGATT TGGTGCCGGG CTCTTTCTTA 
TCTTATTGTG TGCAGTGATT ACAGAGAAAT CACTACGCTT ACTGATAAGC ACCGCCAAAC 
ATGTTCATTG TCCGTCATAC GAAACTGCAA TGGAGGCTCC CTTCGGTGTT GCAGGTTTCC 
GCTTTGTTGC AATCAACATG TTTGTCATGG CGTACGGTGC CATGCTGTCT TACCTCATGA 
TTGTTAAAGA CAGCTTTTCC GTCATGATTG GCATAGAAAC TGACGACTTT CCAATGAAAC 
GAGCTGTGCT TTTGCTAGTT TCTATATTGA TTATGGTGCC TTTGAGCTCG CAACGTGATA 
TGGCTGATTT GGCATGGACT TCGCGTTTGT CGGTTATCAT TGATACCGTG TTGGTGGGTT 
TAGTCGCGTG GAATGCCCCG ATTGAAGAGT CATTTCAAAA TCGCGGCGGT TGGCCAGCCG 
TGCTAATTGA CACTTTCCAC GCTGACACAA TATTTGTCGG CTTGGGTGTA TTATCCTTCG 
CCTTTGTGTG TCAACACTCA GCGTTCATTA TCGCAGGAAG TTTGGATAGA CCTACGGTGG 
CCCGCTGGTC CATTGTCACT CGCAATGCAT TGATCTTATG TGCATGCCTA GCAACGACGT 
GTGGAGTGTC TGGATACCTA GGCTATCTCG ATAAAACCCA AGGCAATATC CTCAACAATT 
TGAGTGTCGA CTCATTCTCA GCTAACGCGG CACGTGGGAT GCTTGGTTGT ACCATGCTTT 
TTGTTTATCC TCTCGAGTCC TTTGTTGCTC GACACGTCTG CGTTGTTTTG CTATTTTCGG 
GGCGGCGGGC CCATGAAGGA GAAGACTCCG CCATTTTGAA CCGACGGGAC CGACGAATTG 
GGCTGACTGT ATTGCTCTAC TTGATTGCAG TGATACCCGC AGCATTCTTT GAAGATTTGG 
GGTCAGTATT GGCTGCTACA GGAGCCGTGG GTGGATCCTG CCTTTCCTAC ATTGGACCGG 
GACTGGTATA TTTTGGGGTA CACGGTGGTC GCTTCTTGGA ATTGGTTGAT GCATCTTGGC 
TAGGGTCTGT GTGGAGAACC AACAACAAAT CCACAGCAGA TCGTCATACA GGTCAATCCA 
GTCGACCTAC TCTTGCAGTT GAGACGACAC CCTTAGTTGC AGGACAAAAC GATCCTCCCA 
AACAAGAAAA AACTAGTGAG CCGTTGGTCC AAGAGAGTTT GCTCTTCTCG ATTTTGAAAC 
GCATTGTATG GTACATTTTG TGGATGCCTT TTTGGTGCAG CATCGCCAAA ATAGGGCGAA 
GGGGGCTGAC GTCGCACATC TATGATTTGG CGTTGAAGTC TCCCCATCCC ATTCGCATTG 
GAGAGGTTGA GTACCATCGT GTGGCCGTGA GCCGAAAGGG ATACATAGAC GCAGATCCGG 
AGGAGGCCGC GGTTTTGAGA CCGTCTTCCC AGCACGCTTT CGACGATGCC TATTTGCCAA 
TGTTGGCCAA GGAGCAACAG CAACGCCCGA AGAACTCTTC GATGTTGAAC CGTCCCTTTG 
TGCCGTCGGC AGGCAGAGAA GGCCAGGGCA TAAACCAGCA AATCGGCAAA AAGCTGCTGG 
AGCAACAGAG ACAACAAGAG ACAACGGTGG AACCCGATCC GCAAGAAGAC CCGCCGACCT 
GGGTCGATTT CGGAATCGCC ATCTTTCTGG TCCTATTCGG TGTGTTGGCC ATGCTGGCCG 
GTCTAATTTC ACTGTACATC AAAGGCTGA 

 

Protein sequence

MTRTAPPSPF FRPSTPHVVV VRQSPGGTRT TVSQKEVHEH KSTMLGCTAN LVNAIVGSGI 
VGIPYAIQQA GFGAGLFLIL LCAVITEKSL RLLISTAKHV HCPSYETAME APFGVAGFRF 
VAINMFVMAY GAMLSYLMIV KDSFSVMIGI ETDDFPMKRA VLLLVSILIM VPLSSQRDMA 
DLAWTSRLSV IIDTVLVGLV AWNAPIEESF QNRGGWPAVL IDTFHADTIF VGLGVLSFAF 
VCQHSAFIIA GSLDRPTVAR WSIVTRNALI LCACLATTCG VSGYLGYLDK TQGNILNNLS 
VDSFSANAAR GMLGCTMLFV YPLESFVARH VCVVLLFSGR RAHEGEDSAI LNRRDRRIGL 
TVLLYLIAVI PAAFFEDLGS VLAATGAVGG SCLSYIGPGL VYFGVHGGRF LELVDASWLG 
SVWRTNNKST ADRHTGQSSR PTLAVETTPL VAGQNDPPKQ EKTSEPLVQE SLLFSILKRI 
VWYILWMPFW CSIAKIGRRG LTSHIYDLAL KSPHPIRIGE VEYHRVAVSR KGYIDADPEE 
AAVLRPSSQH AFDDAYLPML AKEQQQRPKN SSMLNRPFVP SAGREGQGIN QQIGKKLLEQ 
QRQQETTVEP DPQEDPPTWV DFGIAIFLVL FGVLAMLAGL ISLYIKG