Gene PHATRDRAFT_48888 details

Gene Information

• Locus tag: PHATRDRAFT_48888
• ID: 7194964
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 592861
• End bp: 595093
• Gene Length: 2233 bp
• Protein Length: 645 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002183386
• Protein GI: 219126274

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACATTG CATTCCTTGC CTCGAGCCTG CTGATTTTCG CACGGGGTAG GTACAACTGA 
ATCAGACCTT CTTTTTGGCT CCCTTGCTAA ATGCTTCTTC GAGTTCTTGA GAGTATGCTG 
GTTGTTTCAT TTCTCATAAA TTCACTTGAC AAATCATCTT AGGCGAATCT TCAAGAATAC 
AAAGTAGGAA CAGGCTATGG AGACCAGAAA ACCAGCCATC GTAGGCTTGA CAGCCATACA 
GACTGTATTA ATGCGATCGC CAGCTTCACC TTGATTGATA CTGGAACAAT TCCCAACCGA 
CTTTACACTA TAGGATTAGA TGATCTGTCA TCCGCTATTG GCCCGTTTAA TATTCGGGCA 
AATGTTGTGG ACGACATCTG TACTGAGAGT GCTAGTATCC GTCTTGAAGG TGGTCCGTTC 
CCAAATCGCT GCGAGAGCAA TCTTCCTTTC ACAGCATTTG GAGACCCATC TTTAATGGAC 
CTAGAAGATT CAGTCGCCAA CTACTGCAAC AGGGCAAGAA ATATCCCTCC TGGAATTTAC 
ACCATTAAGG CTACTCCCTC AGCTGGACCA GCATGCTCTC ACGAAAGCGA GGGAGACGAA 
TTGGCAGGGA ACCATTACAG AGCCCCAAGA CTGTGTTAAT GTGATCGCCA ACTTCACCTT 
GATTGATACT GGAACAATTC CCAACCGACT TTACACTATA GGATTAGATG ATCTGTCATC 
CGCTATTGGC CCGTTTAATA TTCGGGCAAA TGTTGTGGAC GATATCTGTA CTGAGAGTGC 
TAGTATCCGT CTTGAAGGTT GTCCGTTCCC AAATCGCTGC GAGAGCAATC TTCCTTTCAC 
AGCATTTGGA GACCCATCTT TAATGGACCT AGAAGATTCA GTCGCCAACT ACTGCAACAG 
GGCAAGAAAT ATCCCTCCTG GAATTTACAC CATTAAGGAT ACTCCCTCAG CGGGACCAGC 
ATGCTCTCAC GAAAGCAAGG GAGAGGAATT GGCTGTGTCG TTTGTGATCC AAGAGCCAGA 
GCGCCCTACT GCCAAGCCTT CTGCCCATCC ATCCAAGAGT GTTTCAAGCT GGAGCCAGGT 
TGGTATTGAT ATTGATGGTG AAAATGCTGA TGACAATTTT GGAGGATCTG TTACCTTGTC 
AGCTGATGGT ACAATAGTAG CAATTGGGGC TTCAAGCAAT AATGGATCCG GAACTGGAGC 
TGGTCATGTG CGGGTGTACA AAAGGACTGG GACAGTATGG AATCAAATTT TTGGGGATGA 
CATTGACGGC GAAGATGTGG ACGACGCTTC CGGAAATGCT GTAGCCCTGA CCGCAGACGG 
CAATGTGGTG GCAATTGGGG CTCTGAATAA TAATGGATCC GGGTTTGAAG CTGGCCATGT 
GAGAATCTTC ATATGGAATG GTGACATGTG GAAACAGCTT GGCCTCGACA TTGATGGAGC 
AAGATCTGGA GACACGTTTG GTTGGGAACT CGCACTTTCT TCTGATGGGA AAACAGTAGC 
CGTTGGGGCA CCATTCTCAG GTTCTGCTAT AACTGGCTAT GTGCAGGTAT ATAATTGGAA 
TGGATCCGTC TGGCAGCAGC TTGGCCAAAG CATTTTGGGT GAAAATGATT TCGATTTTTC 
TGGAAGCTCT GTTGCCCTGT CTGGAGATGG AATGATTTTG GCAATAGGGT CTCCAAACAA 
TGATGGCTCT GGTACAAATA ACTTTGTTGG GCATGTGCGA GTATTCAAGT GGAATGGGTC 
CCTTTGGAGC CAAGTTGGTG TTGACATTGA TGGCGAAGAT ATTGACGATG TTTCTGGAAG 
TTCTGTTTCC CTGTCTGCGA ATGGTAAAAT AGTGGCAATT GGAGCTCGTG ACAATAGTGG 
ATCCGGAACT AATGCTGGTC ATGTGCGAGG ATACCGGTGG AACGGGACAA GCTGGAAACA 
GATTGGACTT GACATTGATG GCGAAAATCC TGGCGATAAA TCCGGTCAGC AAGTCTTGCT 
ATCCATGGAT GGCATGACGG TGGCAATTGG GGCCATAAGA AATGATGAAG CTGGAATAAA 
TGCAGGCCAT GTTAGAGTGT TTAAGTGGGA CGGGGTAAAT TGGATGCAGG TTGGCTTGGA 
CATAGATGGC AATGGCCCTG GCGAATTTAC TGGTGCCTCC CTTGGACTTT CATCTGATGG 
GAAGACTGTG GCAATTGGTG CTCCGAGGGC TGGAATTGGC GGTCAAGTGC GAGTTTACAG 
CATTGATGGC TAG 

 

Protein sequence

MHIAFLASSL LIFARDCINA IASFTLIDTG TIPNRLYTIG LDDLSSAIGP FNIRANVVDD 
ICTESASIRL EGGQEISLLE FTPLRLLPQL DQHALTKARE TNWQGTITEP QDCVNVIANF 
TLIDTGTIPN RLYTIGLDDL SSAIGPFNIR ANVVDDICTE SASIRLEGCP FPNRCESNLP 
FTAFGDPSLM DLEDSVANYC NRARNIPPGI YTIKDTPSAG PACSHESKGE ELAVSFVIQE 
PERPTAKPSA HPSKSVSSWS QVGIDIDGEN ADDNFGGSVT LSADGTIVAI GASSNNGSGT 
GAGHVRVYKR TGTVWNQIFG DDIDGEDVDD ASGNAVALTA DGNVVAIGAL NNNGSGFEAG 
HVRIFIWNGD MWKQLGLDID GARSGDTFGW ELALSSDGKT VAVGAPFSGS AITGYVQVYN 
WNGSVWQQLG QSILGENDFD FSGSSVALSG DGMILAIGSP NNDGSGTNNF VGHVRVFKWN 
GSLWSQVGVD IDGEDIDDVS GSSVSLSANG KIVAIGARDN SGSGTNAGHV RGYRWNGTSW 
KQIGLDIDGE NPGDKSGQQV LLSMDGMTVA IGAIRNDEAG INAGHVRVFK WDGVNWMQVG 
LDIDGNGPGE FTGASLGLSS DGKTVAIGAP RAGIGGQVRV YSIDG