| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48798 |
|---|
| Symbol | |
|---|
| ID | 7195106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011687 |
|---|
| Strand | - |
|---|
| Start bp | 265091 |
|---|
| End bp | 266064 |
|---|
| Gene Length | 974 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | fucoxanthin chlorophyll a/c protein, deviant |
|---|
| Protein accession | XP_002183454 |
|---|
| Protein GI | 219126416 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAATATCTCG ATGCCCGACG ACTCGGACGT ATCCTACCCC GCTCGACCCT CGTAAACTTT
TTTTCGGTTG TCACAACGAA CCCCAGTAGC ACCATGAAGA CTTCTGCCAT TGTCGCCATT
CTTGCCGTCA GCGGCGCCTC CGCCTTTACT CCCAATACCA ATGCGCCCCA ACAATTGACC
AAGGTCGGCG CTACGGCTGA GCTCGACAAC ATGCTCGGTG TCGATATCGA AACGGGCAAG
AAGATTGTGA GTGTTCTGTT TGTCGTTTCG GTAGCGACTA TGTAGGAATA TATATCGAGG
AGTGATATTT GACACTCGTC CAAGTGTTCG TACGCTCGCT CACCAATTAT TTGCTGTTCT
TCTGTTTCTA GTTTGACCCG GTCGGTTTGG CGCAATGGGC TCCGGCGGAT TTCCTCCGCA
AGGCCGAACT CTCCAACGGG CGTTCCGCCA TGCTTGCCAA CGTTGGTTGG TTCTGGCCCA
AGATTGTGGG AACCTTCGAT TCCCAGGATG TCACTACCAC CGACCCTATC AAGGCCATTG
CCGAAGCCGA TCTCCAATGG TGGGCCCAAT TCTTTGTCTT TTGTGGTATG CTCGAAGCCG
TCAAGTACCG TGGTGAACTG GAGGGCAAAT CCTACACCGG TGAAGGACCC GCCGTTATAG
ATTGGGCCAA GCAGTGGGAT AAGCTGAACG CGGACCAGAA GGAATCCATG CGCTTGAAGG
AACTCAAGAA CGGACGCCTC GCAATGTTGG GATTCGCTTC CTACGTCGCC AACTACTACA
TTCCGGGATC CGTTCCTGGT CTGCCGGCTG GATTCTAAGT GACCTTCGTC GCTACCGTTT
AACGCTTGCG GTAGATCGTA ACGCGATTGC TATCTCTGGC TGCTGCTAAA CTATGAAATG
TTTAGATTGG TCGAGCGGTA CTACATAGCC TGCGACTACA GACACGTAAT ATTAGGACGT
AGACTATACC GTAC
|
|---|
| Protein sequence | MKTSAIVAIL AVSGASAFTP NTNAPQQLTK VGATAELDNM LGVDIETGKK IFDPVGLAQW
APADFLRKAE LSNGRSAMLA NVGWFWPKIV GTFDSQDVTT TDPIKAIAEA DLQWWAQFFV
FCGMLEAVKY RGELEGKSYT GEGPAVIDWA KQWDKLNADQ KESMRLKELK NGRLAMLGFA
SYVANYYIPG SVPGLPAGF
|
|---|
| |