Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48539 |
Symbol | Trx-h2 |
ID | 7194714 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 155396 |
End bp | 156112 |
Gene Length | 717 bp |
Protein Length | 165 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | thioredoxin h |
Protein accession | XP_002183039 |
Protein GI | 219125548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCCCAAATAT TCTCTTTCTC GCGGTTCCCC CGCATAGACC TAAGGACAAT CAAGATGCGC TCATACCTTC TAGTAGCAGC TGTTATGCTG TACGGAACCT TTATGACGGG AGATGCCGTT CAAGGACCCG CCCCCGCAAC GAAAGCTCCC TCCAGTTGTG CAGCGGTGGA CGACACCACT TTGTTCGGCG TCGTACAGCG AGTACCGGCG CTCTCGGTAC GAGGTGGACA AGTCCACGAA CCGGAGAGCT TGGCAGATGT CGATGCGCTT GTCCTGAAAG CGGGATCGGA AGGAAAGCTG GTGGTCATTG ATTTCTCGGC TACCTGGTGC GGTCCCTGCA AGATGATTGC TCCGCTCGTA AGTCCAGGCT GAGATCGATG AAGATTAGGC TGAGTCAAAC AGGCAACGAG TCATTCCTTT TTCAATTGGA TTGCTAATCT CGTTCGGGAC ACTCCAGCAC CTACTCACGC TATCTTTCCA TGTTTCTTTC TACAGTTCCA ACAGTTATCG GAAGCGATTC CCGGGGTGGT CTTTATCAAA ATTGACGTCG ACGAGAACCC CGACACGGCT GCCAAATATA ACGTGTCGGC CATGCCAACC TTTGTGTTTC TTAAAAGCGG TGAAGTTATT GATCGTCTAA TGGGAGCGAA TCCGGCACGT TTGCAGGAAT TGATCGATGA ACACCAGTAA CTAATGTAAG GATATGGATG TGTAGCT
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Protein sequence | MRSYLLVAAV MLYGTFMTGD AVQGPAPATK APSSCAAVDD TTLFGVVQRV PALSVRGGQV HEPESLADVD ALVLKAGSEG KLVVIDFSAT WCGPCKMIAP LFQQLSEAIP GVVFIKIDVD ENPDTAAKYN VSAMPTFVFL KSGEVIDRLM GANPARLQEL IDEHQ
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