Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47894 |
Symbol | |
ID | 7203161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 373706 |
End bp | 374967 |
Gene Length | 1262 bp |
Protein Length | 254 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182381 |
Protein GI | 219124166 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTGGA CAAAGACACT GACATCTTGC TTCACCTATA GGATAGGCAA ATCTTTGTAC GTTCCGCTCA CCAGTCGATG CAATAGTCGG ACTCTACCGC TTACCCGGGG TCCCAACTTC TTGCTCCCAC CGGAAGTCGT CGTCGCCCTA TGTCGCGTGC GGGATGCTGA AGGAAACGCA TCTCAATGGA AACACTGGTG CATATGGTTA GAAACACAAG AACGTAAACA AAAGCTACCG GAGCCATCTG ACGATGCTTT TGTCGTGGAG CTTCCTTCAG ACTTTTTATC GGGACGCCCA ACAGTAGAAG AACTTCTGAT GGAGATACAG GAAATTAACC TCTCCGAATT TGAATCCATA GTGATTGCGG GAGAAGGAGA ACCCACACTG AGATTCAACA TATTATCTAA ATTTGTACAG CACGTACAAG AACTGTGTGA TCTACCTGTT CGGCTTTCGA CCAACGGCTT GCTTTCGTCA ACCAGAGCAA AGGACTTAGT GGAATGCGGT GTGGACTCGG TTAGCGTCGC ACTCATGACG AGCGACGCAG ACCAGTACGA TAACCTGATG AATCCGCAGT TGCCTTCCGA ATGCTCGTCG AGGGCACATC AAATGCTGTG TGATTTCGTG ATTGCCGCAC AAAAAGCTGG GCTTCAGGTT GAACTTACGG CGATCGATCG GCCCGAAGTT GACCGTGAAC AAACACAGGC GCTGTCAACA CGATTAGCTG GTGTGGATGT TCGATGGCGG TCATACTTCC CGTAGAACAC TTTTTATCGT TATTTGTATT TTTAAAGGTA CGAATATGCT ATGTAGATTA TAGCAACAGT GACGATCATA TAAAGTGCTT TTACCATCAT TCGAAAGCAA TGCTGATGCC GCTTCGTATA TTTCCACGCA ACGAACACAC TTCCTCATCT CCATTCTCTG TGTCCTATGT TTTCCCGGCG GCGAATCATG CCCTGATAAA TCAAAACGAC GTTGCCTTGC TGGAATGTGA CACAGATGTT ACGCTTCAGT TGCATTGCAT TCTTTCTTCG CCACTGGCGC AATTTCTGTA TCTATTGTTG CCATTGAATT TTGGTTCGCA CCCTGCACAA GCATTTTTTC CGTGGTAACC CAAGTTTCTT CTTTTATGAT TTTGTGCTTT TTCTGCAACT GCCCTACGCG ACCTGGATTC GACAGATTCT CGTCCCTCAC TGTCAGCTGT AGTCACCCCT GTCATGGGTA GCAGTGGTAA ATGTATGTCG TTATCGTGTG GC
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Protein sequence | MKWTKTLTSC FTYRIGKSLY VPLTSRCNSR TLPLTRGPNF LLPPEVVVAL CRVRDAEGNA SQWKHWCIWL ETQERKQKLP EPSDDAFVVE LPSDFLSGRP TVEELLMEIQ EINLSEFESI VIAGEGEPTL RFNILSKFVQ HVQELCDLPV RLSTNGLLSS TRAKDLVECG VDSVSVALMT SDADQYDNLM NPQLPSECSS RAHQMLCDFV IAAQKAGLQV ELTAIDRPEV DREQTQALST RLAGVDVRWR SYFP
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