Gene PHATRDRAFT_47865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47865 
Symbol 
ID7203086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp283337 
End bp284431 
Gene Length1095 bp 
Protein Length159 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182193 
Protein GI219123774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.467405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACCAACCTT GTGTTGCCCA CAATCACCGG AATGTAGCTT CGTTTCGCTA GCTTTTCCTT 
TGTACCGGTT TTTTATTCGT CCTTGCTTTG GGCAGCAACA CCGGTTACTT CCATACGGTT
TTGAGTTCCA TGTTTCGACT GGTCGTTTCC CCCGCACGTC CGAAAGGACG GCAATCATCC
TTGTACGGCG CCGCAGCTTT CGTACTCCGA CCGCCGACTC GGTGGACCAC CTGTCGCTCG
CTGGTGCAAC ACACTGTCCC GTTACGGGCG GTGCAGTACA TTCTAACGTA CGAATACGTA
CCGGACGTCT TGGAGAAACG CGGACCGTTC CGCGACGAAC ACTTGCGTTT GGCCCGTGAC
TACGTGACCG AGAATCGGGC CGTGGCGGGG GGACCAACGG GAGCGGTGGG AACCAACGTA
CCGACGGGAG CACTTTTCCT CTTTACCGAC CGGGACGCCG CCCGGGAGTT TGTTGCGCGA
GATCCGTACG TGGCGCACGG GATTGTCACG GCCCACACCA TTCAAGAATG GAACGTGGTG
GTACAGAAAG CAGATGACGA CGACGGCGAC TCAAAACGTG TGCACAGTAA GCAACAAGGT
CCGTTGTAGT GACAAGTAGT GAGACCAATG GTCGAGATGC TGGTCGTTGG TCTTTTGTAT
CCAACGGTTG TCGTGCCTGG TACAGATACA ACCTTGTCTC GATTATGCCC TTTGTTACGA
ACGTTGCACA CCTTTGCACA TGACTTTAAA ACTCCCAGAA AAAATTGGGA TTGTGGGGTC
CAGCATGAAA AAATCTACTG TTTCTAGAGG AAAAAGGAAA GTCTCGAAAA CACCGCGAGC
TTGACCAATC CAGTAGACCT TTCGTGCGTA ATACATTTAC TGTTCGTTTG ACATCTAAAA
CAAATCGGTT TCGCTGCTTG GCCTTACCGC TGCTTGGCCT TTGTAGGGTA TCTACGCGGG
AATGCGGTTA GCTTCAGTTC AATGTTGCAA TGGCGTTGTG CTTGCGGCAG TGCTCGGTGG
AACACGGACA CAGATGAAAG ACGCAAAATG TGAACTGAAA AGGAAACCGT ATTTCTCGGT
TTCCGGGTAT TTTTG
 
Protein sequence
MFRLVVSPAR PKGRQSSLYG AAAFVLRPPT RWTTCRSLVQ HTVPLRAVQY ILTYEYVPDV 
LEKRGPFRDE HLRLARDYVT ENRAVAGGPT GAVGTNVPTG ALFLFTDRDA AREFVARDPY
VAHGIVTAHT IQEWNVVVQK ADDDDGDSKR VHSKQQGPL