Gene PHATRDRAFT_47365 details

Gene Information

• Locus tag: PHATRDRAFT_47365
• ID: 7202516
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011681
• Strand: +
• Start bp: 402786
• End bp: 404852
• Gene Length: 2067 bp
• Protein Length: 603 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002181551
• Protein GI: 219122436

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.776919
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTACCATGTA GTTCGGCTCA CTGTTTACAA TTCGACCTCT AGCGAGAGAG ACGTTTCAAC 
CGTAAAGGGG GGGAATTTGC AACCATGAGA CGAGTCCGTG CGTGTCTCGG TGCGTGTGTG 
TACGTGACCC ACTTGGTCGC GTCGGGGGCA TTGACGGCGA ACGACCGACG AAGTCCTACC 
CGCCCCACAC ACTGGGTGAC CTTGTCGGAT CCCCGGAAGC GGTATCCTTC CGGAAACAGT 
CTGTACGCCA AGGATGTCCC ATTAGCAAAC AACAATCGTC GATCCGCAGC GCCGTACTCG 
TACTCAAGTA CCCCCGTGAA CGACTTGGAT CAAGATTTTG GCTACTATGG TGAAAAAGAT 
GATGACGATG ATTGGATGAG CAATCCCGTG GATTTCGACA ACAGCATCGA CGAAAGCGCC 
GTTACTAGCA CGAGAAGACC AAAACTTGTC AAAGGGGCCG ACAATTCACG TCCCAATTCC 
CATTTCTTCA GTCGCAAATC CTTACAAGAT CCAATCTTTG CGTACCAAAC GAAGGGGGCC 
TCGGAAACCT TTGCCCAATT GTGCCAGGGG GCTGGTATTG CGCGTCCCTC CAAAATTCAG 
AGTTTGGCTT GGCCCATCTT GTGCAAAGGC TCCCACACGA TTGTGGCGGA CCAAACGGGA 
TCCGGAAAAA CCTTGGCCTA TCTCATTCCT TTGTTGACAC GCGCCTTGGA GGACCGCAAC 
GCTCAGCCGG CCGGAACCGC CGTACCCAAC GGATCGCCTC GTATCATCGT CCTGGCTCCG 
ACCGCCGAAC TGGCCGACCA AATTCGAGCC GTTTGCGAAC AAATGACCGC ATCCGTTTCA 
TTCTCGACCC TTGTAATCAC GGCGACCGGG AAATATTCCA CTTCGATTCG TGATCAAATT 
CGTATGCTCC AACGACAACC CGTGGACGTT CTGATTTCGA CACCTGGACG GATCGCCACC 
ATTTTGCGAA CGCGCAATTC TGGCTTGGAT TTGAGTGCGT TGCAATCCAT CGTTCTCGAC 
GAAGTCGACG TCTTGTTGGT GGACGACACG TTCGGCCCGC AATTGCGTAC GGTCGGGGCG 
GCGGCACCCC TGGATCGAAC GCAATTTGTC TTTGTCACGG CAACGCTACC CGACACGGTT 
GTCGAAACTG TGGAGAAAGA GTTCCGCGGC GTACAGCTAA TCAAAGGCCC CGGTTTACAC 
CGTGTGGCAC CGACCGTGCA AGAAAGACTC GTCGACGTCT CCGTCCCTTC TCAAAACAAC 
CGAGACGCCA AACTCTGTTT TGACGTCAAG GCCAAACAAC TACTGAAAGC CTTGCGACAG 
ACTCGGTGTC GCCGAACGCT CGTATTTTGC AATACCGTGG AAAGTTGCCG CTCGGTGGAA 
AACTTGCTAA AACGCAAGGA TCGCAAGGGC AACGTCTTTG AAGTCCGCGC CTATCACAAC 
GCCATGACAC CAGAAAATCG CAACGAAAAT TTGGCCGTCT TTAGTCACGG CATTCGGACT 
ACACAACCAG AAAAGGTGGA TTACGTACTG GTGTGCACAG ATCGGGCTGC TCGAGGCGTC 
GACTTTGAAA GGGCCCCCGT GGATCACGTC GTCTTGTTCG ATTTTCCCAA AGATCCGGCC 
GAATACGTCC GTCGAGTTGG ACGAACGGCG CGAGCGGGAC GGACCGGAAC GAGCACCGTC 
TTCGCCTACG GATGGCAACT GCCGATCGCT CGTAGCGTCA TGGGAAGCAA GTTGGATAGC 
TTCACCATTG CTCGCGAAGA GCGGGATGAA ATGGATACGG AGGAAATTCG AGGTGGAGTG 
CAGGCGCGGC TCCACCGAGG TGACGGCGCA AATAAGAAGC ATGGTTCGAA GCATATAATA 
AAGGGTAACA TTGAGAGCGG AAAGCAGTGG AAGTGAAAAG AAGACCCGCC TCTCCTTAAC 
AAGGGTCTAT CTAGAGAGAG TTTTGTTGTT CTGCGAGAGT AACTGAGCGA GTAAAGGTAG 
TAACGGTTTA CTCGAAATGG CAATTTTCTT TTTTTGACAT TTCAGCTTAA CGAAGCAAAT 
TTAGTGAGCA AAGCAATAGC ATAATTT 

 

Protein sequence

MRRVRACLGA CVYVTHLVAS GALTANDRRS PTRPTHWVTL SDPRKRYPSG NSLYAKDVPL 
ANNNRRSAAP YSYSSTPVND LDQDFGYYGE KDDDDDWMSN PVDFDNSIDE SAVTSTRRPK 
LVKGADNSRP NSHFFSRKSL QDPIFAYQTK GASETFAQLC QGAGIARPSK IQSLAWPILC 
KGSHTIVADQ TGSGKTLAYL IPLLTRALED RNAQPAGTAV PNGSPRIIVL APTAELADQI 
RAVCEQMTAS VSFSTLVITA TGKYSTSIRD QIRMLQRQPV DVLISTPGRI ATILRTRNSG 
LDLSALQSIV LDEVDVLLVD DTFGPQLRTV GAAAPLDRTQ FVFVTATLPD TVVETVEKEF 
RGVQLIKGPG LHRVAPTVQE RLVDVSVPSQ NNRDAKLCFD VKAKQLLKAL RQTRCRRTLV 
FCNTVESCRS VENLLKRKDR KGNVFEVRAY HNAMTPENRN ENLAVFSHGI RTTQPEKVDY 
VLVCTDRAAR GVDFERAPVD HVVLFDFPKD PAEYVRRVGR TARAGRTGTS TVFAYGWQLP 
IARSVMGSKL DSFTIAREER DEMDTEEIRG GVQARLHRGD GANKKHGSKH IIKGNIESGK 
QWK