Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46105 |
Symbol | |
ID | 7201341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 278491 |
End bp | 280128 |
Gene Length | 1638 bp |
Protein Length | 485 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180404 |
Protein GI | 219119281 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.916775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ACGATGATAC ATGGTCTGGA ATGAACAAGC CGAAGCCCAA TGATAGGACT ACCGCGACTA ATGTAAATAG CAGGAAGTCC TTAAAAACGG ATAAGGCTGG TGGGAGCGTT TGTTATGAGG GTGCTACAGA GAGTCCTGTC CGCGCCACCG GCAAAAGCAC TGCGGAGACT TCTCACTACT ACCACATCTG CGCCTTTCTC AAGTTACCAA TCAATCGGAA GCTTCCATTC TGAAAATTTA GGAGATCTAA TAGCACGATC AGAAATCGAA TATAGACCCC CGCTTTTGCC GTTCGGCGAG TCTGTTACGC CGAGCGATGA TTCTGATTTT CTTTTAGATC TCGACCAGTG GACATTTCTG AATCACGGGG CTTTCGGAGC TGCACTAACT GTTGGATTTG ATCGTGCCGC TCAATGGAGA CGATACTTGG AAGCTCAGCC ATTGCGTTAC CACGATCGAG ACCTACTTCC CCATTTGGCC TATTCGTGTC GACGTCTTGC TTCCTTCGTC AACGCTGATC CGCGCAATTT AGCTTTGCTC CCGAACGTCA CGTCAGGATT CAACAGTTTG CTTGCCGGCT ATGTTCGAGA AGTAAAAGAC GCTGCGCACA TCATCGTATG GGACACCAGT TACGGAAGTG TGAAGAAAAT GGCCAAACTC TATGGCGGTA ACAGAGTGAC GGAGATTCCA TTCCAATCGA GATATCTGAC CCAGCTAGCC GATCCTTTAG AAAATCCATC TGTTGTTTTC CAGACTGCAC TCGACGATCA TTTACTGTTA AATTCCAAAA AGTGGGAAGG AAAACAGCCT TTGCTGGTAT TAGACCACAC GACTTCCAAT ACAGCATTGA CCTTTCCGAT CGAAGAACTC GCCGCCCATG CCAAATCTAT CGTTCCGAAT CTTTTGGTCG CTGTCGACGG CGCACACGGT TTACTCGCGC AGAACTTGGA TATTGCCCAA ATCCCATCAG TAGACTTCTA TCTATCGAAC GGGCACAAAT GGCTCTCCGC ACCTCGCGGT GTCGCCTTTT TACACGCCAC GGGCGCGTTT CACGACACAA TTCTTCGTCA ACCGGCAATA GTGAGTCACG GTATCGACGA GCCCGACCTT TTGAGTCGCT ATGTTTGGGA TGGCTGTAGA GACTATGCCG CTGCGTTATC ACTCCCATCG ATACTTGAAT TTTGGCAGGA GAGAGAGCCG TGGATGGTAC GGAAGAATCT CAAAATACAG TTACGACAAG GAATCAAAAT TCTGGCTACC GAATGGTACG GTAGCGATTT CGGGGGCGAA GAATCCTGGC CCGGTTGCGT TACGCTAGCT GAATTCGATT CTCCCGTGTT GTCACCGATG GCCTTGGTGC AGTTGCCTGT TCCTGGGAAA ACTTCGGGTG ATGCCAAGGC AGTCCAAGAC TACCTATACA AGCAACACAT CGAAGCGCCC ATCAAATGCG TGAACGAGAG ACTCTACGTT CGAATTTCGT GTCAAATGTA TAACACGAGC AAAGACTTCC ATGCTCTCGC TGCATCGATA CAGACATTGT CGAAGCTGAC AGTGAATGCC GGGTATCTTT GAAAAAGAGA GACCCAACGG TGGGGTATAA ATTGACAATA ATGTTGTTGT CTAAATGCAC TTGCCCAC
|
Protein sequence | MRVLQRVLSA PPAKALRRLL TTTTSAPFSS YQSIGSFHSE NLGDLIARSE IEYRPPLLPF GESVTPSDDS DFLLDLDQWT FLNHGAFGAA LTVGFDRAAQ WRRYLEAQPL RYHDRDLLPH LAYSCRRLAS FVNADPRNLA LLPNVTSGFN SLLAGYVREV KDAAHIIVWD TSYGSVKKMA KLYGGNRVTE IPFQSRYLTQ LADPLENPSV VFQTALDDHL LLNSKKWEGK QPLLVLDHTT SNTALTFPIE ELAAHAKSIV PNLLVAVDGA HGLLAQNLDI AQIPSVDFYL SNGHKWLSAP RGVAFLHATG AFHDTILRQP AIVSHGIDEP DLLSRYVWDG CRDYAAALSL PSILEFWQER EPWMVRKNLK IQLRQGIKIL ATEWYGSDFG GEESWPGCVT LAEFDSPVLS PMALVQLPVP GKTSGDAKAV QDYLYKQHIE APIKCVNERL YVRISCQMYN TSKDFHALAA SIQTLSKLTV NAGYL
|
| |