Gene PHATRDRAFT_45855 details

Gene Information

• Locus tag: PHATRDRAFT_45855
• ID: 7200961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 478753
• End bp: 480782
• Gene Length: 2030 bp
• Protein Length: 650 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002180055
• Protein GI: 219118571

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.306932
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGACATTGG TATAGTATAT ATCAACTTTG CAGTTCGTTC CGAGAAATAC GAATAGTTCA 
TCTGTAGAGA AATCAACATG GCGACTATGG AAGAGTCTCT CCTGGATGAG ATCACGGTAG 
CTGCTTCCGT CCAGGAGCCA GTCAAAGTCC AGCTGGTGGT ATCGGTGCAA CCTAACGACG 
ATCCCATTCC CCAACTGGCG CACGATGGCA TTACTGCCGG CGATCTAACG ACGGCGATCC 
GTGTCTTGAA CGCCGTCGCC TCCCTATATC CGTCTCACAA GGGACAAGAC GAACAGCGCG 
AACAAGGATT GGAGCGCTAC AAACAGCCCA ATCTCCGGTC GTTCCGCAAA GCGCTCGCGG 
CTTGTCTCGA GCTGCACCGC CGCACAATGT TCAACGGCAA AGACGAGGAA GAACACTACG 
AACGACGACT GAAGGACCGT TCTTTGAAAC GGCAAAAGAC AGCGGAACGG GATATGAACA 
AAAAGTACAT TGCGAGTACG GCGTTGCGTC AAGGTCGAGT AGAGCGTTTG CAGCAGTTAC 
AAGACGATGC CGCGGACGAG GAACGTCACA AACTGCTCCT CGCCCTGCAA CCCGACGGAC 
ACGTCGACAC CACCTTGGCA CGGACAATCC CACTGTTGGA AGACTCCTCC GCCCCTGCTG 
AACACGTACA ACTCCCCAAG CTCCGTTCCT GTTACGTTTG CAAAGTGCGG TTCCGCGAAT 
TACACGAGTT CTACGATCAA CTGTGTCCCG CGTGTGCGGC ACTTAATTGG CAAAAACGCC 
ACAATTCGGC AAACCTGCAC GGCCGTGTCG CTATTGTGAC GGGATCACGA GTCAAGATTG 
GGTACCAAAC CTGTCTCAAA TTGTTACGGG CGGGCTGCGT TGTGGTGGCC ACCACCCGAT 
TCCCCAACGC CGCCGCGGCA ACGTACCGAG CCGAAGCCGA CTTTGATAGC TTTCGATCGA 
GACTACACGT GTATGGGCTA GACTTGCGGG ACGTGACGGG CTTGGAAGCA TTTACTCGCT 
TTTTGAAGCA AAAGTATACG GATGGGATCG ATATTCTGAT CAACAATGCG TGTCAGACAG 
TCCGCCGGCC CGTGGGATAC TACCGGCCGC AAGTGGAACG CGAACAGATG TTGTGGATGC 
AGGCCGATCA AACGCACAAA TCCTTGCTGG ATGACTGTGC CGACTTTGAA CGAGTTCGCC 
GGCGATTACA ATTGGATCAT AAACAACAGG CTTCCTTGCA AGTAGAAGGA AATAAGGATA 
ATGTTCCTGC TATTCTAGAC GTTGAAATGG ACAATGGAGG GAATGGTTTG TCGGAATCGG 
AAGAGGCAAC AAGGAACGAA AGTGCGCTTG TGGCGTCAAC AAAACCGAAC AACTCAGTCG 
CTTCGACGCC GTTCGAAGCC ACAGGCCTAT CGCACTCCGC AGCTATGTCC CAGATGGTGA 
TTCTTCCCGA AGACGCGGGT GTCTCCGATT CAGTGCTGCC CCCGGGAGTG TCGGATGTCA 
ATGGACAGCA GCTCGATTTG CGGACAACGA ATTCTTGGCT CCTAAAGATG GAAGAAGTAT 
CGACACCGGA GATATTAGAG TGTTTCTTCA TCAATGCTAT CGCACCTTTT GTTCTCAACT 
CTCGACTCAA ACCTCTTATG ACTACTCCCA ACACTGCCAA TCGTTCTGAC CGTTATATCA 
TCAATGTTTC GGCTATGGAA GGGAAGTTTT ATCGCTACAA AATGCCCAAT CATCCTCATA 
CTAATATGGC AAAGGCGGCT CTCAACATGC TCACACGCAC ATCAGCGGAA GACCTGGCGA 
AGCAGCATCG GATCTTCATG AATTCGGTCG ACACTGGTTG GATTAACGAT GAGAATCCAA 
CCGTTAAAGC CAGCAAGATT GCCGAAACCA ACTTGTTTCA GACTCCAATC GATGAAATTG 
ACGCTGCCGC TCGTATTTTG GATCCGATCT TTGAAGGCGT CAATGGCGGA ACAGAGTTTA 
AGAAAGATTA CGGCAAGTTT CTGAAGGATT ATCGCGAAAG TGAATGGTAA 

 

Protein sequence

MATMEESLLD EITVAASVQE PVKVQLVVSV QPNDDPIPQL AHDGITAGDL TTAIRVLNAV 
ASLYPSHKGQ DEQREQGLER YKQPNLRSFR KALAACLELH RRTMFNGKDE EEHYERRLKD 
RSLKRQKTAE RDMNKKYIAS TALRQGRVER LQQLQDDAAD EERHKLLLAL QPDGHVDTTL 
ARTIPLLEDS SAPAEHVQLP KLRSCYVCKV RFRELHEFYD QLCPACAALN WQKRHNSANL 
HGRVAIVTGS RVKIGYQTCL KLLRAGCVVV ATTRFPNAAA ATYRAEADFD SFRSRLHVYG 
LDLRDVTGLE AFTRFLKQKY TDGIDILINN ACQTVRRPVG YYRPQVEREQ MLWMQADQTH 
KSLLDDCADF ERVRRRLQLD HKQQASLQVE GNKDNVPAIL DVEMDNGGNG LSESEEATRN 
ESALVASTKP NNSVASTPFE ATGLSHSAAM SQMVILPEDA GVSDSVLPPG VSDVNGQQLD 
LRTTNSWLLK MEEVSTPEIL ECFFINAIAP FVLNSRLKPL MTTPNTANRS DRYIINVSAM 
EGKFYRYKMP NHPHTNMAKA ALNMLTRTSA EDLAKQHRIF MNSVDTGWIN DENPTVKASK 
IAETNLFQTP IDEIDAAARI LDPIFEGVNG GTEFKKDYGK FLKDYRESEW