Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45824 |
Symbol | |
ID | 7201077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 389244 |
End bp | 391025 |
Gene Length | 1782 bp |
Protein Length | 580 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180224 |
Protein GI | 219118915 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.122291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTACGA CTCCTCCGGA GATGATCCCG CTGGTAGCGT CTCAACTCGC TCCGGCTTCG TACCAGACCA CTGGTAAGCC GGTAACGGAG CTCCCCCGCA CACCCGATAT GCGTCGTAAG CTGTCGCAAC TTAAGGACGA CGATGATGAC GACGATTCCC AAGAACATAA AACGACCGTC TGGCAAACCT TCATTCACTT GACTAAGGGT TACATAGGCT GTGGCGTCCT CAGTTTGCCT TGGGCCGTGA GTCAGTTGGG CGTACCGCTG GGATGCACCA TGATTGTCCT CATGAGCTGC TGGAGTTCGT ACAATTGCTG GACGGTAGTC AAACTCAAAC GATTCATTGA GCGGAAAAAC GTCAGCGTTG GCAACTACGT GCCCCAGACT AGTGCGATTG ATGACGCCGC CAGTGACACC CCGAGTAACG TCTCAAACAA TACCAACATT ACCTACCCCG ACGTTGGCGA ATGGGCTTAC GGAAAACAGT TCAACAGCTA CGTCACGGCC TGTGTCTGTA TTCAACAACT CGCCATCTGC ACCGTCTTTT TAAGTTTCAT TGGTGAAAAT ATCCTGGCCG TGCTCGAGCG TATGGAGGTC CACATGCTTT CCACCCACGC CGGTGTCCTC ACTTTGGCCC TGCCGGTGGT TCTCTCGCTC TCCTATCTGC CCAATCTCAA GTCACTATCT CCCGTTATGG CTGCGGGGAG CATTACACTT ATGGTTGGCT TTGGTGTGCT GGGCTACGTC ATTGTCAAGT TTTGGGACGA GCGACCCGAA ACTACCCCTA CAATTAACGT GTCCCAAGCG CCCCTGGCGG TTTGTGCCAT TCTCTACTCT TACGAAGGCA TTTGCCTCAT TCTACCCGTC GAGTCGGCCA TGAAGGATCC TCAACATTTC AAACCCGTCT TTGTGGCTTC CATGGCAACT GTGGCACTCA TTCTTGCCCT TGTTTCGTCG CTCTCCGTCA TGGCCTTTGG CGAAGTCACC AACGGAAGTA TTACGGCTTT TCTAGTCAAG GAGTTTTCCG ACAATGAGAA TATCTCGTTA TGGCTTATGA TTTCCAATAC GGCCGTGAGT TTGTCCGTGC TGCTAACGTA TCCGTTGCAG CTCTTTCCCG CGCTGGAACT GATTTCACCC TGGGTGCAAA GCAAGTTTCC ACCCAAGACG GACGCGGCTG ATGAGGACGA CCTCGACGCC TTTGAGCCCC TACCGCCGCT TCCGGAACAC GAAGTAGCCT CGATTGGGTC ACACGAATAC GACAACTTTG AATTTGATGT CGACGAGGCA GAACCGGCCA AGAATGGTGA CAACAAGGAC GAAGACGATA CGAGTCGAGC CGGTATGAGT TCCGTCACGA GTATGTTTCC CGAAATGACA ATGCCCGGGG ATTCACCAAT GCTGCGTACA GCTCTGGTGA TATCCACCTA CCTAGTCGCC GTTGTCGTTC CCAACGTACA AGCCCTTATT TCTTTAGCTG GAGCTTTGGC GGGATCGTCC ACGGCATTAT TAATACCGCC AATTTTGGAA CTGGCCTTTA TCAAACATCT CGAAACGGAC GCTTCACAAG AGGAAGTGGC CAGGGTAGAC GAAAGACGAT GGCGGTTACT GACGTCAATG CGGGACAAAT GGCTTTTTGA AAAGGTCAAG AGCTATATCT TGTTGGCGCT TGGGTTCGTC TTTTGTGTGT TTGGAACGTA CGCGTCCCTG GCCGATATTG TACGCATCTA TTTGGGCAAA TAAAATCAAC TTTAAAGCAA CAAAGAAACT GTTTACATTG CG
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Protein sequence | MATTPPEMIP LVASQLAPAS YQTTGKPVTE LPRTPDMRRK LSQLKDDDDD DDSQEHKTTV WQTFIHLTKG YIGCGVLSLP WAVSQLGVPL GCTMIVLMSC WSSYNCWTVV KLKRFIERKN VSVGNYVPQT SAIDDAASDT PSNVSNNTNI TYPDVGEWAY GKQFNSYVTA CVCIQQLAIC TVFLSFIGEN ILAVLERMEV HMLSTHAGVL TLALPVVLSL SYLPNLKSLS PVMAAGSITL MVGFGVLGYV IVKFWDERPE TTPTINVSQA PLAVCAILYS YEGICLILPV ESAMKDPQHF KPVFVASMAT VALILALVSS LSVMAFGEVT NGSITAFLVK EFSDNENISL WLMISNTAVS LSVLLTYPLQ LFPALELISP WVQSKFPPKT DAADEDDLDA FEPLPPLPEH EVASIGSHEY DNFEFDVDEA EPAKNGDNKD EDDTSRAGMS SVTSMFPEMT MPGDSPMLRT ALVISTYLVA VVVPNVQALI SLAGALAGSS TALLIPPILE LAFIKHLETD ASQEEVARVD ERRWRLLTSM RDKWLFEKVK SYILLALGFV FCVFGTYASL ADIVRIYLGK
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