Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45676 |
Symbol | |
ID | 7200459 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 901805 |
End bp | 902801 |
Gene Length | 997 bp |
Protein Length | 308 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179936 |
Protein GI | 219118318 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATG CGGTCCCATC ACCTTTTCGG AGCAGTGTCG CATTTAATAT AGCACCCGAG ATGCCCGCTG GCGACGATGA TGCGACTGCA CGACCGCATC AACATACTCG GTTGAGAAGC TGCATTTTCT TTGTTATGGG CATTTTGCTT GCTCTAGTTG TTTTCGATTC AATGAAGGAA AAAAGAATCG AGAGAACAGC AGCCTCATTC TTTACATGGA TCGAATCTCA CCCTTTCCTT GGCGTGCTGG CTGTGATCTT GGTTTACACG GCGGCAACAA TTTGCTTTGT GCCGGGATCC GTTCTAACGA TAGGAACTGG ATTTGCATTC CGAAGCGCTT TTGATGATTT CGGTAAAGGA CTTGCGCTTT CTTCCCTGGT TAGTATCTTC TCCAATTGTC TCGGTATCAC ATTACTATTG CTCATCAATT TGTTCTTCGT TATGCCAGGC TGTTTTTGTT GGAGCCAGTT GTGGATCGGT CTGCTCGTTT CTTTTAGGGA GATATTTGTT TCGAGAATGG GTAGTACGAC TGGCCTCTTC GTATCCTATA TTTCGTGCCA TTGATAGAGC GCTGGAAAAC AATGGGCTAA AAATAATGGT GCTGCTCCGG TTGTCACCGC TCATCCCATA CAACGCTCTC GACTACATTA GTGGGGTGAC GTCTATCTCG TTATTTTCGT ACAGTGTAGC GCTCGTTGGA TTACTACCTG GAACGATTAC ATTTTGCGCC ATTGGTGCCA CAGCTTCGAG CCTAGCAGAA GGCACCGATC GCAGTGAAAA CGGGGGTCTG CGAGTATTCG CATTAGTCTT TGGGTTGATT TTCGCCTTTT TGGGAGCCGG GGTCGCGTCT TTTTACTCTA AAATTGAACT TGATATGATT TTACAGGACG AATCAGAAGG AACGGTACCG ATTGTCGCGC CGGATAGTGA GGAAGAACAA TACGTTCGCC ATGCTGGCCG CTTCAGTGAT CATCCTATTG AAGAAGGGAT TGTATAA
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Protein sequence | MSNAVPSPFR SSVAFNIAPE MPAGDDDATA RPHQHTRLRS CIFFVMGILL ALVVFDSMKE KRIERTAASF FTWIESHPFL GVLAVILVYT AATICFVPGS VLTIGTGFAF RSAFDDFGKG LALSSLAVFV GASCGSVCSF LLGRYLFREW VVRLASSYPI FRAIDRALEN NGLKIMVLLR LSPLIPYNAL DYISGVTSIS LFSYSVALVG LLPGTITFCA IGATASSLAE GTDRSENGGL RVFALVFGLI FAFLGAGVAS FYSKIELDMI LQDESEGTVP IVAPDSEEEQ YVRHAGRFSD HPIEEGIV
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