Gene PHATRDRAFT_45515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45515 
Symbol 
ID7200720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp415789 
End bp416874 
Gene Length1086 bp 
Protein Length314 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179640 
Protein GI219117700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.219674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGCTAAGGTG TATCGCAGCT TTAATACACT ACGATGAAGT CCAGCGCTCT CCTTTCACTG 
GTAATCTTGT TCGGCACTGC GAGTCTGGGG CAAGCCTTTG CTCCCGACCC TATCCAAGCA
CGACTTTCCT ACCAATCCAT ATCATCGGCT GTCACCTCAT CCCGAACGGA TGATATGGAG
CTGGGTAGCA CAGCATCTTC CCGGCGAGCC TTTTTCCAAA TTTTGAGCGC CTCGTCGTTG
CTAGTGAAGC CTTTGTTGTT TCCACAATCC GTTGTCGCTG CAGAATCGAC CAAGATTCTC
GTATTGGGTG GCACAGGCTT TGTCGGTTCG CAAGTGATGT CGACGCTTCG AGATATGGGA
ATCGAAACCA TTGCAACGTC TCGCGACGGT CGCGATGGAA CTATCGCTTT AGACTTAACC
TCGGAAAATG TGCAAGACCA GATCCAAAAG TTATCGCAAG GTTGTGCGGC TGTGATTTCC
TGCGTGGGTG CAATTGGGAC GGCCGACGAT AAGGCCGTCA ATAGCGGTAC CGGGCTAGCG
GCCAGTGCCG CCAAAGCGGC AGGCGTGTCA CGCTTTGTCT ACATTACGGT GGCGCCGGAG
GTGAAAGAAT TTGCTCGCGA TATTGATTTT TTGAAAGGCT ACATGGAGGG AAAATCGTTT
TCTCGTGAAA CCGTCCTCGC AGCGTTTGAC GGCAAGGCCA CTCTGATTGA GCCAACTTTT
ATCTATGGAG GGGGTTCCTT TGAGCTCAAT CCTCCTCGCG TTGCTAGCTT TTATGGACAA
TTCATTGAGG GCTTGCTCTC GTCGTCGCCA ATCCGTACCT TGGAACGAGT CCTGTCGCCG
GGAATCATCA AAATCGCTTT GGAGCCGCCC GTTCCCGTCG AAGCCGTGGC GCAAGCCGCC
GTCGCGGGTG CCCTGGGAAA GACAGACTCG ATCCTCGATA GCTACGACAA GATCAAATCG
GCGTCACGCA CTCTGTGAGC TATTATGCGT ACGTAAAGGG CTTGATGGAT ATCGTAACCA
GGCAGCCATG TAGCGATAAG ACTACTTAAA TTAGCTGCAC GCCCAAGAGC AACATGCGAC
ACACGT
 
Protein sequence
MKSSALLSLV ILFGTASLGQ AFAPDPIQAR LSYQSISSAV TSSRTDDMEL GSTASSRRAF 
FQILSASSLL VKPLLFPQSV VAAESTKILV LGGTGFVGSQ VMSTLRDMGI ETIATSRDGR
DGTIALDLTS ENVQDQIQKL SQGCAAVISC VGAIGTADDK AVNSGTGLAA SAAKAAGVSR
FVYITVAPEV KEFARDIDFL KGYMEGKSFS RETVLAAFDG KATLIEPTFI YGGGSFELNP
PRVASFYGQF IEGLLSSSPI RTLERVLSPG IIKIALEPPV PVEAVAQAAV AGALGKTDSI
LDSYDKIKSA SRTL