Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45368 |
Symbol | |
ID | 7200046 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 962913 |
End bp | 965499 |
Gene Length | 2587 bp |
Protein Length | 791 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179548 |
Protein GI | 219117507 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.415443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTATTGTCTT TTCGTGCAAC ATTATGTCAA GTGGTTTAAA GAGAGTGAAA ACGGCACGCT TTAGCGTTTG GGAAGTCGCC GAAGGAGCCA AGCTAGCGAG TGCGACCTTC CCTTCCACCA CCATGGCAAC CGGTGAGTGC TTGTATGAAC GAAACGTTGC TTTTCACTGC ACTTCCAATT TCCCAATGTT TGACTTTAGC CTTACACTGC AAATCGTATG CTGTATCGTA ATGTAGAGGC CAAGAAGGTC GATCCGGTCA AAAAGGTAGA CCCTCCAGCC GGTGCCGTAG CAAAGAAAGG TTCATCCGTC AAAAAGCCGG AACCAAAACC TACTCGACCG TGGACCGAAC CGTTACAGCA GGATTTCGAT CGTATCTTTT CTGTTGGTGA AGAGTGTATT TCTGGACCAG AATTGCAAAC TCTCTTGACT GCCAAAGGTC GTGGTTCGGA GTCGACCGGA TTCAACCTCT ACGATGGCTT TGAACCTTCC GGACGCATGC ATATTGCCCA AGGGGTGTTT AAGGCAATGA ACGTAAACAA ATGCACGTAT GAGGGCACCA ACGCGACCTT TGTCTTTTGG GTCGCCGACT GGTTCGCGTT AATGAATGAC AAGATGGGTG GCGATTTGGA AAAAATTCGG ACGGTAGGAC ACTACTTGAT TGAAGTCTGG AAGGCAGCAG GTATGGACCT TTCCAACGTT GTCTTCAAGT GGGCTTCGGA AGAAATTACG ACTCACGCTG ACAAGTACTG GCCTACGATG TTGGACGTTG CCCGAAGATT CAACGTCACA CGCATTAAAA AATGCTGTCA AATTATGGGG CGCTTGGAAG GATCCTTAAC GGCGGCGCAG ATTCTCTACC CACTCATGCA GTGCACGGAT GTATTTTTTC TGAAAGCTGA TATTTGCCAG CTGGGCGTTG ATCAGCGCAA GGTTAACATG CTGGCTCGAG AATACTGTGA TGCGGCTGGG ATTAAGCACA AACCTATCAT TTTGTCGCAT CATATGCTGT ACGGTCTCAA AGCTGGTCAA GAGAAAATGT CCAAATCTGA TCCCGACTCG GCCGTGTTTA TGGAGGATTC TGCTGCCGAC GTGGAGCGCA AGATTATGAA TGCCTACTGT CCAATCGTTG CGGAAGTTGC GGCTGGAGCT ACGGATGGAG AACCACTGGA TGCTGGCAAA GAGTCGATGC ATCTCAAGGG TGATGGATTG AAGAATCCTT GCTTAGACTA TATTGAGAAC ATTATTTTTA GTCCTCCAGG CGCAACCTTC TCGGCTGGAT CAACAACGTT TCAGGATTAT GGTGCGGTAA GAGATGCATT CTTGTCAAAG CAAATTTCGG AGGACGAGCT GAAGCGGGGA TTGATAATCG AGCTGAATCG ACTCCTTGAG CCAGTTCGTT CCCACTTTGA TACCAACGAA AACGCAAAAA ACCTGCTGTC ATTGGTACAG CAGTACAAGA AGGAATCAGC CTCAAGTATT ACGGAAAAAG TGGTACGGCG ACTGAACTTG GTCGAGCTCA AAAAGGTTCC TGCCGGAGCC CATCTCGTCT TTGCTCCATT GCCATCCGGC AGCCCGACGT TGCAGAGCGC TATGGATGTC TTCACACTAC TCCAAGCTGC AGAAGATCGC CCTTGCGTCT TGCTGCTTTC AGATTGGACC GCACGGGTTT GCAATTCGTG CGATGCTGAT CTTAAAGTCA TCGCAGCCTA TCACTCAGTA TTTGTGGCCT CGCTCAAAGC GCTCAAGCCA CGTTTGATGG AAAATGTCCA AGTGCTCCTA CAGAGCGACG CCATCCTCGC CGATCCGTCC AATTATTGGA TTAGCGTCAT TAATGTTGGT CGCCATTTTA TGCTTGACGA TATCATGGGC CCTTCCATGA AAGATTCCGA AGGTGTTGGC AGGGTCATTG GTCGACTGAT GCAAGTCGCT GATGCGGCCG GTGTAGAGCC CGCGAGTATC GCCATGGCAG ATTCCGAAGA CACCAAGATT GAGGGCAACC TCGTGACGGA ATTTTTCGGA AAGAAGCTTC CCTCGTTGTC GGCTCCATCC GTATCGTTCC GAACTCTCCC GTCTTTACGC CTACAGCCCG AACGGGAGTC GGATGCTTTG AGGAACGAAA ACGATGAGTA TTTCTTACTA GACGATCCCA AGGTATGAAA CACTAGCATG CAGACTCGGA CAAATGAATG GAAGGCACGG TAACTCACCG GGACGTAATT TCTTACTTTT GTATAGATCA GCGGCAAATC GAAATTGAAA AAGGCCTTTT GCGAGCCCGG CAATGTTACG TTTTGTCCTC CCATTGCTTT GGCCGACATG TTTGCTCTAA AGGGCGCAAA GGGAGTTTTA GAAATTCATC GATCGCCGGA AAACGGTGGC GACCATATTT ACGAAAGCGT CACGGAGCTG GAGAAGGATT TCGCGGACGG CTCGCTGCAC CCGAGTGATC TCAAAACGGC TGCGATTGCC GTCATGGGAA CTGTTATGGA GGAGCTGGCG GCTGGTCTCA AGGCGGACGG GGACGCCATC AAGGCTGGCA AAACGCTCAA GGCCTTTCAG AAAAAAGCGG CTAAACAAAA AAAGTAG
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Protein sequence | MSSGLKRVKT ARFSVWEVAE GAKLASATFP STTMATEAKK VDPVKKVDPP AGAVAKKGSS VKKPEPKPTR PWTEPLQQDF DRIFSVGEEC ISGPELQTLL TAKGRGSEST GFNLYDGFEP SGRMHIAQGV FKAMNVNKCT YEGTNATFVF WVADWFALMN DKMGGDLEKI RTVGHYLIEV WKAAGMDLSN VVFKWASEEI TTHADKYWPT MLDVARRFNV TRIKKCCQIM GRLEGSLTAA QILYPLMQCT DVFFLKADIC QLGVDQRKVN MLAREYCDAA GIKHKPIILS HHMLYGLKAG QEKMSKSDPD SAVFMEDSAA DVERKIMNAY CPIVAEVAAG ATDGEPLDAG KESMHLKGDG LKNPCLDYIE NIIFSPPGAT FSAGSTTFQD YGAVRDAFLS KQISEDELKR GLIIELNRLL EPVRSHFDTN ENAKNLLSLV QQYKKESASS ITEKVVRRLN LVELKKVPAG AHLVFAPLPS GSPTLQSAMD VFTLLQAAED RPCVLLLSDW TARVCNSCDA DLKVIAAYHS VFVASLKALK PRLMENVQVL LQSDAILADP SNYWISVINV GRHFMLDDIM GPSMKDSEGV GRVIGRLMQV ADAAGVEPAS IAMADSEDTK IEGNLVTEFF GKKLPSLSAP SVSFRTLPSL RLQPERESDA LRNENDEYFL LDDPKISGKS KLKKAFCEPG NVTFCPPIAL ADMFALKGAK GVLEIHRSPE NGGDHIYESV TELEKDFADG SLHPSDLKTA AIAVMGTVME ELAAGLKADG DAIKAGKTLK AFQKKAAKQK K
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