| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45350 |
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| Symbol | |
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| ID | 7199982 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 922004 |
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| End bp | 926117 |
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| Gene Length | 4114 bp |
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| Protein Length | 1335 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179319 |
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| Protein GI | 219117049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTGGC GATTCTTCGT GAACGGTCGT CGGTGGCGCT GTGGCGTCGG CACTTTCAGT
TTGATCGGAA TGTTAGGGTT CTGGAACCCG GCGCGCGGAT GGCTGGTACA GCGAGCAGTA
CGAAACGTGA GAGTCCCTGG ACGTCTCAAT GACGAAATCT TACGGCAGAA AATGGGCTCT
ACCCGAAGTT TGACGCGACG GAGTATGGTA GCACAGTGGA ACGTTGGTGA TACCGTCTTG
GTCCCTTCCA CGAGAAATAA GAACGACCAG TCGCTCGCAC AAGGTGTAAT CTGCGATCAC
CGGGGTTCGG GATGGTATTC CGTACAACTT GGTAGTGGAG CAGACAAGCG CATCGTCAAG
TTCCGTGGTA CGCAGCTTGA ACGGTATCTT TCCGACGAAG CAAAGTCTCA AGCTTCCATG
GAATCGTCGG CGCCGTTCGG AAATTTCGAC AACGTTCCGT TCAATATTTC GTCTCTTCCT
GTCATGGACG TTACCAATCC GGTTACCAAG ACCAAGTCAA TTTTGAAAAG TGGAGCACCG
GGACCTGCTC CACCGCCACC GACGATCATT GATCTAGACG CTGCTGTTCG GTCTATGGAC
GATCCTTTCG ATCCTGTGGA AAACGTTGCA CAAAGGAACT ACTTGCAACA CGTAGCGCAC
CATTCCAGCT TTGAACAATG GGTGGTCTTC ACAGATCTCC ATTGCTCAGC ATCGACAATG
GATGCCACAA TAGAGACCTT GCGAACTGTG CACCAGCACG CTGTGAAGAG AAAAGCAGGC
ATTCTCTTTC TAGGAGACTT TTGGCATCAT CGACGAACGT TGCGCATCGA CTGCCTCAAC
ACTGTTCTAC ACGAATTATC GACCTGGACC GTTCCCATGG TCATGATCCC AGGCAATCAC
GACCAAGTCA CTCTGGGTGG CCTAGTGCAT GGACTTACAC CATTGGAGCA CGCCTACCGC
GTTACGGCCA ACAAGGGCTC GTTTTCCACA ACCTTTCCCG GGCCGCTCGT CTTTTCACAC
GCCACCGTAT TCGCGAACGC CCTGTTTATA CCACACATTC GTGACAATGC TATCATGGAA
TCTGTTTTGC AGTCCACGCA CGCTCAGAAC GCAGAAGCGC TCTTTGTACA TGCCGACATA
ACTGGTGCTT ACATGAACGA TCTAATTGTC TCTCTGGGTG GTGTTCCACC ACGCATGTTC
CCTGGTAACA AGCCAATCTA TTCCGGACAT TTTCACAAGC CTCACACCGT CAAGCAAGGC
AATAAGGCGA TCGAATACTT AGGATCTCCG TACGAGGTGT CGCTGGCAGA GGCTCAGCAA
CCGAAAGCTC TCGCCGTGCT GGATGCATCC AATGGTTGGA AATGCATCGA AAAAATTCCT
TTGAGCATCG GCCGAAAGCA CTTTCGGCCT CTAAACGAGG ACGAATTCTT GGCACTTCGT
CCAAAGCAAT TTGGAACACG GGACCGGGAT ACAGATGTGT TGGCTTCTAT TAGCGTGGAC
TCCGGTGATC GTGTGCTTTT CTCCGTGGAC AAGGATAAAC TAGAGAAGTT GCGGCGGTCT
TCAGAGGTTG GTGAAACCAA TCCAATCGAC ACTCATGTGA GCATTTTGCG TCAAAAAGGC
ATCACCGTGG AACTTCGTGA AACACGGGAG TTGCCTGTTG GCCCAATGGA ATCTGCATCG
CCCGACATGA AGGGTGACTA CATCAACCTT TCGCTCGAAT CCACTTGGAC CTCATTTATA
GAAGGGGAGG TGCGACGAGG GGCCATGACT GAAGAAAAAG CTGATTTTTT ATCGAAGCCT
GGTTTAGATA TTTTGGCAGA TCTCGATTCC GTGGTAATTG GTAGTATGTC AGGAAATAAA
ACTGATGTTG AGCTTTATTC GCTGACCGTA GAAGGGTTTG GCCCATTTCG ACAGCCAGTT
ACCTATCCGC TACTAGAACG AGGGCTAGTT CTGTTGAGAG GGTCGAATAA AGATGGGGGA
TCTGACAGGT AATTGATTGG GATGTATTCT TTTTGCTGAA TTGATATGCC GTTTCTGAAT
TGAAGAGTCA AATTGATATT GCAGCAACGG AAGTGGAAAG TCGTCACTGG CAATGTCGGC
ACTTTGGGCT TTTACTGGGA GCATTGATCC CCGCCCATTG CAAGACTCAA AAGTTTCGGA
CGTCGTGCAC GATTCGTGCA AGGTAATTGG ACTTCCACGC TGTGACGCGT TATGTCTTTC
ACAAGTGCAC TTACTCTTTC GCTCTTTCTT GTAGGCAGCT CGCGTTACGG TGAAGGGAGC
TTTCAATGGT GTTGAATTTT CCGTCACTCG AACAAAAACG GCAACAAAGG GGAACATTGT
ATTTACCCTA GGAGGCGAAG ACCTGACGAC GCAGTCTGCC AAGGAAACGC AAGAGCTTAT
CGACGAGACC TTTGGCGTGA ATTCACAGAT TCTCGCTAGA ACAATATTTA ATGGGCAGCA
TGCATTGAAT GATTTATTAG AGGCTACCGA CTCGAAACTA AAAGACGAGC TTGCCACTGT
CGTGCCGTTG AGTGGGTGGC AAGATGCGGT AACGCTTGTG CGGAAAATGG GACGCGAAGC
TGGTAAAAGG GCATCCGAAA TTGAAGGAAT GTTAGCTCTT CGCGAAAAGG ATTTGGAAAG
GCTCGACCGG CGACTAGAAG ACGCTACTTC TGTAGTTTAT GAAACGGAAG CCAGCCTCCG
AAGTACAGAA CAATCCGTCA CAGACGAGTT GGAAGGGTTG TATTTTGCTG GAACCCATTG
CATGGAACTA GATGACTGGG ATGCTCGGCT TCTTGATGCA TCTGAAAAGG TAAAGGCTCT
TGAAAGGAGC TTGCGGTCCA AGCAGACTGA AAGAGACGAA GTAATGAAAT CAGCAGCGGC
GGAGGCGACT CGCCGGTCGA GTTTTCTCGA TTCTGCTGCT GATAGCTTCA GGAGGGTCGA
AGCCCGATAT GGTCGGTTGG CGATGGATTT TGAGACGGCA ACCAAAAAGG TCCAAGAACT
CGAGAAACTT TGGAGTTTGG ATCTGTCCTC AGGAGAGCTT GATACAGCAT ACGCTCCGGT
CCTTTGCCCA ACATGTGGTC AAAGCGTTTC AAGTGACGAC TCCGGACATG ATCTCAGAAG
CCTTAAGGGG GCTATGGAGG ACGATATTAG CGTTGCGCTG CTCCGGCTCC ACGAAGCGCA
GACCATGGTG CAAGACGTTG GCGGTGAACT CGCCGCTGCG AAAGCTCAAC ACGGCGAAGC
CCTCTCTTTG GTCAAAGACT TGAATACTCA AAAAGAAAAA GAATCGCAGG TATGGTCAGA
AACCATCTGT AAACAAGAAA GAGCACTTGC TGACGCTCGA GAAGCCCAGT CGGTTGCATC
ATTTGAGTAT ACATTGGCAG TCAAGGCTTT CCAGCAAAAA GCTAGAAGAG ATGAACTTCA
GTCTCAAATC GATAGACAAC ACCAAGCCTT GAGCAACGTG CGAGCACACG CAGAAGCTGT
AGAAGCGGAG ACTATGGAGT ACAGGAACTT GGTGAAGGAG TTACAAGCAA GCCTAGATAC
AGAAGAGAAA CAAGTGGCTC TGATGAGCGA TCTGTCAGAT GCATTCGGAC AAAGGGGAGT
GCAGGCTTTT GTGCTTCAAT CGGAGATCGA AATCTTACAA ACGTTGACCC AATCCTTTCT
CGATGACTTC AGCGACGGGA CCCAAAAGCT TAGCCTTTCG CTTGACGCAG GTGACCGGAT
TTCTCGGCGG GCTTACGTCC GCTCCCCCGA TGGCGCCTAT CATGAACGCC CGTTGGCCTC
GCTCTCTGGT GGACAATGGA GACGATGTTC ACTTGCACTC AATCTTGGCT ATGCTGACCT
TGTTGCTAGA CGAGGCAGAT TCCGATCGTC TCTTTATATA ATGGACGAAC CCTTGACTCA
CTTGGATCGC TCAGGTAGAG CGGATGTAGG AAGGGTATTT CGAAAGCTCC TGCGTCGATC
TACTACTAGC GGAGAAGGAG GGCTCGCCCC GTCGACGATA ATTGTCATTT TGCAAGATCT
TGCCGCTGAG GAACTTGGAG AGGCCTTCGA TTGCATCGAT GAAGTTGTAA AATTCCAAGG
GACAAGCCAA GTTTTTGTAG ACGAAGAGCT TTAG
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| Protein sequence | MFWRFFVNGR RWRCGVGTFS LIGMLGFWNP ARGWLVQRAV RNVRVPGRLN DEILRQKMGS
TRSLTRRSMV AQWNVGDTVL VPSTRNKNDQ SLAQGVICDH RGSGWYSVQL GSGADKRIVK
FRGTQLERYL SDEAKSQASM ESSAPFGNFD NVPFNISSLP VMDVTNPVTK TKSILKSGAP
GPAPPPPTII DLDAAVRSMD DPFDPVENVA QRNYLQHVAH HSSFEQWVVF TDLHCSASTM
DATIETLRTV HQHAVKRKAG ILFLGDFWHH RRTLRIDCLN TVLHELSTWT VPMVMIPGNH
DQVTLGGLVH GLTPLEHAYR VTANKGSFST TFPGPLVFSH ATVFANALFI PHIRDNAIME
SVLQSTHAQN AEALFVHADI TGAYMNDLIV SLGGVPPRMF PGNKPIYSGH FHKPHTVKQG
NKAIEYLGSP YEVSLAEAQQ PKALAVLDAS NGWKCIEKIP LSIGRKHFRP LNEDEFLALR
PKQFGTRDRD TDVLASISVD SGDRVLFSVD KDKLEKLRRS SEVGETNPID THVSILRQKG
ITVELRETRE LPVGPMESAS PDMKGDYINL SLESTWTSFI EGEVRRGAMT EEKADFLSKP
GLDILADLDS VVIGSMSGNK TDVELYSLTV EGFGPFRQPV TYPLLERGLV LLRGSNKDGG
SDSNGSGKSS LAMSALWAFT GSIDPRPLQD SKVSDVVHDS CKVIGLPRCD ALCLSQAARV
TVKGAFNGVE FSVTRTKTAT KGNIVFTLGG EDLTTQSAKE TQELIDETFG VNSQILARTI
FNGQHALNDL LEATDSKLKD ELATVVPLSG WQDAVTLVRK MGREAGKRAS EIEGMLALRE
KDLERLDRRL EDATSVVYET EASLRSTEQS VTDELEGLYF AGTHCMELDD WDARLLDASE
KVKALERSLR SKQTERDEVM KSAAAEATRR SSFLDSAADS FRRVEARYGR LAMDFETATK
KVQELEKLWS LDLSSGELDT AYAPVLCPTC GQSVSSDDSG HDLRSLKGAM EDDISVALLR
LHEAQTMVQD VGGELAAAKA QHGEALSLVK DLNTQKEKES QVWSETICKQ ERALADAREA
QSVASFEYTL AVKAFQQKAR RDELQSQIDR QHQALSNVRA HAEAVEAETM EYRNLVKELQ
ASLDTEEKQV ALMSDLSDAF GQRGVQAFVL QSEIEILQTL TQSFLDDFSD GTQKLSLSLD
AGDRISRRAY VRSPDGAYHE RPLASLSGGQ WRRCSLALNL GYADLVARRG RFRSSLYIMD
EPLTHLDRSG RADVGRVFRK LLRRSTTSGE GGLAPSTIIV ILQDLAAEEL GEAFDCIDEV
VKFQGTSQVF VDEEL
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