Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45293 |
Symbol | |
ID | 7199946 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 758537 |
End bp | 760368 |
Gene Length | 1832 bp |
Protein Length | 533 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179500 |
Protein GI | 219117411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCCA TCAATACAGC TTCTCGCGCT CGATATGGTT ATCGATTTTT GAAACGGCCG TTGGCGCTCC TCACTGCTTC CGTCCTCGTC GTGGTATGCG TAATCCTGAT CGGATTCAAC ACTCTCCAGA GAACGAGCGC ACCAAGATTG ATTGCCAATA CTCCATCGCT ACGTTTCCGG CCAGACACTG CGTCTTGTCG CTTTTTCTTG GCGGAATCGG CCATTCCCCA CGGAGGCCTG GGTCTATACA CTGCCATCGA CATCAAGAAG GGTGACTTTG CGCAATCCAT GGCCGATCTC TGCATCTACG TAGCCGACAC TCCAAAAGGC ACCGATTTCG AGACACACAG CTGGGCGCGA GACGTCTTTA ACGGAGATTT TGAAGGAAAG AATCCGCGTG CGGCATGCGA GGGCTTTGCC ACACTGTAAG TGCAACACAA CCAATCGACA TAATGGATGG ACAAGAACCG AATTTTGGGT TTTTGCCGCC CGTTTTCCAA TATCTCTCAC AATTCATCCG CTTGGTATGC TAGGTTCAAC TCCATGCCTC CAGGGGTCAG TACATCCAAG CTTATGCCTC AAAATGTGAA CACGAATGCG GGTCTGCACC GGGCGACGCA CGCCGGCGCC GGAGCGGTTT CGCACTATTT TGGAATCTGG TCGAAGGCTA TTCAAGATAT TACGGCAGGA GCAGAGCTCA GTAAGTTAAA TTACCAATAT ACACAGTTTA CCGTTTATAT TGCCTGCCGA AACACACCGC TCACGTCGTG TATTCTAATT TTGTGGTCAG CGATCGACTA CGGCGATTTT CCGTACCAAA AGGGGAAAAA GTACGTGGCA CCCAAGCACG ATCCCGCTTG GCTGCTCGAG AACGGCATGT GTATTGACAA TATCAAAATC CAGCAGGCAG TCGATCCGCA AATGGGCCGT GGAGCGTTTG CTTCGCGACG TCTCGCCAAA GGCCAGCTTG TGGCCCCCGC CCCGTTACAA AGCTTTCCCA GCCGAAAAGC GTTTGCGCGA CAAAAACCAG AAGCCCTATT CGTCAACTAC TGCTTCCAGC CGCGCGGAAC CGACATTCTT CTGTTTCCGT ATGGCCCTGG GGTAAATTTG ATCAACCACA GTAGCCAAAA AACAAACGTC GAATTGCGAT GGTCGACGAA CCCATATCAC CATAAGGAAT GGCTCACTGT GGAGCTGGAC GATTATTTTA AACTCGACAA ACCGGGTGGT ATCATTTTGG AAGTAGTTGC TACACGAGAC ATTGCCGAAG GAGAAGAACT ATTTCTAGAC TATGGGTCGG AATGGGAGCA AGCATGGGAT CAGCATGCGG AAAATTGGAA ACCTGTCGAT GGCGCCGATC GATATGTCTA CCCCGAAGAA ATGGATAATA CTGAGCCAGT ACGGACAGTC GAGGAGCAAA AGAACAGGCC TTATCCAGAA AATTTAGCCA ACACCTGTTT CACGCCAAAC TGGGAACGCG ACTTCGGCGT GATGCGATGG AAACAACCTG ATTTTGATTG GCCCGAGGGC AACGTCAACT GTCACATTCT GAAGCGAGAA AAGAACGCCA AAGGCGACGA TGAGTACGAG GTGTCATTGA ACTTTGATTC ATACGACTAT ACATTTGACC CAAAAACGCC TAGGAAGAAA CTGTACATTG ACACTCATGT CCCCAGGAGT GCAATAGGAT GGGTCGAAAA AGCGTACACC AGCGACCTCC ATTTGAAAAA TGCCTTCCGC CATACCATTC CTCTGCCAGA GCACCTGGTT CCTCCGTTGT GGAAAGCCGC TATTCAATAA GAGACTCGGC AGGTGTCATA TATCTTTTTA CG
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Protein sequence | MVSINTASRA RYGYRFLKRP LALLTASVLV VVCVILIGFN TLQRTSAPRL IANTPSLRFR PDTASCRFFL AESAIPHGGL GLYTAIDIKK GDFAQSMADL CIYVADTPKG TDFETHSWAR DVFNGDFEGK NPRAACEGFA TLFNSMPPGV STSKLMPQNV NTNAGLHRAT HAGAGAVSHY FGIWSKAIQD ITAGAELTID YGDFPYQKGK KYVAPKHDPA WLLENGMCID NIKIQQAVDP QMGRGAFASR RLAKGQLVAP APLQSFPSRK AFARQKPEAL FVNYCFQPRG TDILLFPYGP GVNLINHSSQ KTNVELRWST NPYHHKEWLT VELDDYFKLD KPGGIILEVV ATRDIAEGEE LFLDYGSEWE QAWDQHAENW KPVDGADRYV YPEEMDNTEP VRTVEEQKNR PYPENLANTC FTPNWERDFG VMRWKQPDFD WPEGNVNCHI LKREKNAKGD DEYEVSLNFD SYDYTFDPKT PRKKLYIDTH VPRSAIGWVE KAYTSDLHLK NAFRHTIPLP EHLVPPLWKA AIQ
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