Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44884 |
Symbol | |
ID | 7199589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 537564 |
End bp | 538711 |
Gene Length | 1148 bp |
Protein Length | 344 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | chitinase glycoside hydrolase family 1 |
Protein accession | XP_002178798 |
Protein GI | 219116006 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGCAACGACA AACAAGGAGG TGTGCAGGCG GTTCAGACCA AGCTCAACCA TGACGACAAC AGGTCTTGGC AGTGCTGGTT TGATCATCTT TACCTTTGTT GCGTTCCTCC TTTTGCTCTC TTTTGTGCAG AGCAACAATA CTGATTTCGT GGTGGCCGGT TATTTACCGG ATTATCGCTT CTACATCGAT CTTAATCAGA CTGTCCTCGA TTTGACAGAC TTGTTGCTCT TTTCCGTAGA CGCCAAACCC AGTTTGCTAT CTGACAATTG CTGTCTCCAT GCGGATCACT TTAAAATAGT CCAACAAGCG CGAGCGTTCA AACAAAAAGA GCAGTCGCGA GATTTGCGTG TTTGGTTGAC GATAGGTGGG GCGGGACGGT CGTCAGGGTT TCCTGCCCTG TTTGGCGACA CCGAGCGCCA AAAGACGTTT CTGCAGAAGC TGATTGATCT TGTAAAAGCA TACGATCTCT ATGGAATCGA CTTTGATTGC GAACTACCAT TTTCGAAGCA AGAGTACTAC GACTATATGT TGTTCTTGCG AGCTGCTTGT GACAAGCTCC ACGATGCAGG TGTCCACGTG AGTGTCGCCC TACATCCCCA ACAAGCCTTG CCGAAGGCCA TCGCCACTTT GGTCGATCGC GTGCATCTCA TGGCGTACGA TATGCTACGT CGTCAAGGAG CACAGCCGGA AGCACTGCAC CACGCGGAAC TCGACCAAGT CCGCAAGGCG GTACACTTAC TCGTCGACAA CGATGCGCCG GGCGCCCGCA AAATCGTGTT GGGAATTCCT GCCTACGGGC GACACGAAAG TAACCCTGAA CGGGTCAAAA CATTTGCCGA AATTGTGGAC GAAATGGACG CGGTCCCGGA TACGCGCAAC TCCTGGCGGG GATTTAGATT CGACGCACCT AAGGACGTCC GAACCAAAGT CGCATACGCT AGGGACGCCC AACTTGCTGG CGTCTTTCTG TGGGAGTTGG GGCAAGACAA GGCTACCGTT GAGCATGCGC GTAGCGGCAT TCTGTTGCGA GCGGCTGGCA GCGGAAAACT GTACACGGAT ACAGCAATCG AACCAGAATT ATAGCAATGT CGCCTACTTC TCTGGGAACC CAAAAGTAGG GATGGTTTCT TGTTAGGCTA ATTTTAAG
|
Protein sequence | MTTTGLGSAG LIIFTFVAFL LLLSFVQSNN TDFVVAGYLP DYRFYIDLNQ TVLDLTDLLL FSVDAKPSLL SDNCCLHADH FKIVQQARAF KQKEQSRDLR VWLTIGGAGR SSGFPALFGD TERQKTFLQK LIDLVKAYDL YGIDFDCELP FSKQEYYDYM LFLRAACDKL HDAGVHVSVA LHPQQALPKA IATLVDRVHL MAYDMLRRQG AQPEALHHAE LDQVRKAVHL LVDNDAPGAR KIVLGIPAYG RHESNPERVK TFAEIVDEMD AVPDTRNSWR GFRFDAPKDV RTKVAYARDA QLAGVFLWEL GQDKATVEHA RSGILLRAAG SGKLYTDTAI EPEL
|
| |