| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44751 |
|---|
| Symbol | |
|---|
| ID | 7199873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 129496 |
|---|
| End bp | 131354 |
|---|
| Gene Length | 1859 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178936 |
|---|
| Protein GI | 219116282 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00155872 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTTTTTGATT GTGATCTCAA CCCTTTGTTG ATCTACTCAA CAAGCTGCAG CCAAGGGATC
TGATCAATCC CTATCTCAGC TTGTCATTCT TTTGCATCCT TTCATCCTTG CTTTTTCGAC
TGTTTGGATT GTTCCCTGCA AAAGGAAAGT TCTCTCTATA TTGAAGAACA CAAAACAACA
ATGGAGGTCA CAGTTGAGGA AAACAATGAA CTACAAACAT TATAAGGGTA CATTGTACTC
TTGGATCTTT TTGTGGTGGC TGTGAGGCGT TGAGTGTGTG GCGGAAGCGA CTTGGCTTTC
AGCAGTAGGC GATTGAACTT TGGGGGAAAC GGTGTCCTTA CCAGGAGTGA GATCAACACT
CTATGTGATA TCACGAGGTA ACCTGTTCCT AAAGAAGCAC CAATGCCCGT ACCGCTTGAC
AGTGATCTCC ACCGAGCAAG TAGGTTGGAA ATCGGCAAAA ACAGTATCGT ATAAAACGAT
CGCATCATCA GGATGCCCAA AAAATACTAC GCGGTGGCGG CGGGACGTCG GACAGGAATC
TTGGATTCTT GGGTAGAATG TCAAGCACAG GTGCGTGCTT CTGGTCCTCC GCGCCACGAA
TACTACTCAC CACTTCCTCC CACGCGTTGA TTCACACTAC GTGTCGTCCT TTCTTGTCTA
TATCGAAAAG ACTAACGGGT TCAGCGGGGC GAAGTTTAAA AGTTTTCACG ACAAGCAGCA
AGCGGAAGAC TACTTGCGCG CACACGGCCA GACTTCGGCT TCGCCGCCGT CGAACGCCGA
CGTTCGTATT ATAACAGCGT TTAGGTCGGG ACCTCGCTCC CCGGTAGCAT CGCCAGCAAC
AGTCAGTTGC GAAAAAGCCA TTGAGCATAT CCGCAGTGCG CATGCAGCGA GGCCAAATCC
CGATGTTCGC ATCGTCACCG CTTTCACTTC CCGTCCGTGT AAACGAGACT CTCCCGAGTT
TGTTTCCGCA GCCCGTCCGC GAAAATACGC CAAGACGGGG TATTCAGTCG GGAGTGAGTT
AGACAATTCC GAGAATGCAA AGGCGGAGAC GCGGCATCGA TCTTTGTGCC CTGTAGGGAG
CAGGCGGCTC AAGATTCACA TCAATTTTGA CGGCGGCTCA CGGGGCAATC CAGGGGTCGC
CGGTGCCGGT GTTGCCGTCG TACTGACCGA CCTAGATTGG CGGATAGGTG ATGGTCTGTG
CGAACGACTT AACGTGCACC TCAGATTTTT CGTAGGTACA GGTGCCACCA ATAATGAGGC
CGAGTACAGT GGCGCGTTGT GGGCTTTAAC GGTGGCTCGG GAGGAAACAC GTCGTTTCGA
GTCATTTTAC GATTGTGAAG CTCATGTACA GCTTGTTGTG CAAGGCGATT CCAAGTTGAT
CATTCAGCAA CTAAAAGGGA ATTACACCTG CAAAAGCCCC AAGCTGAAGC CATACTACGA
GAAAGCAATT CAGCTTTTAG ATGACTTCCA AAGCTTTGCA CAATTTCGAC TGTCACTGGA
GCATGTCTAC CGAGAAAGCA ACAAACAGGC AGACGGTGCG TTTACTCGAC TGACTTTTAG
AGCTATGGTG ATGCTTTTGC TTTCGCATCT CACTGTAATG GTGCACGTTT ATGCTCTGTG
TGTTTTGTTC CTTGCTAATG TAACTCAGGA CTTGCAAACG AAGCAATGGA TGCACAGCGA
AGCTGGTTGA CAACATCGCT GGATGGGCAT GAAATGCAGC ATGCTCTTAG CGATCGTTAT
CGTGTGTGCT CTCACTGAAA ATAGACAGCA AGAGGCTCGT TCTTGGTTCT GCCGTTTTAC
TACGACAAGA TGTAGCGTAC AAAGCATTCG GTTACAGGCT TTTGGGATAC ATCATATGA
|
|---|
| Protein sequence | MPKKYYAVAA GRRTGILDSW VECQAQTNGF SGAKFKSFHD KQQAEDYLRA HGQTSASPPS
NADVRIITAF RSGPRSPVAS PATVSCEKAI EHIRSAHAAR PNPDVRIVTA FTSRPCKRDS
PEFVSAARPR KYAKTGYSVG SELDNSENAK AETRHRSLCP VGSRRLKIHI NFDGGSRGNP
GVAGAGVAVV LTDLDWRIGD GLCERLNVHL RFFVGTGATN NEAEYSGALW ALTVAREETR
RFESFYDCEA HVQLVVQGDS KLIIQQLKGN YTCKSPKLKP YYEKAIQLLD DFQSFAQFRL
SLEHVYRESN KQADGLANEA MDAQRSWLTT SLDGHEMQHA LSDRYHSKRL VLGSAVLLRQ
DVAYKAFGYR LLGYII
|
|---|
| |