| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44665 |
|---|
| Symbol | |
|---|
| ID | 7197651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011672 |
|---|
| Strand | + |
|---|
| Start bp | 1203508 |
|---|
| End bp | 1205076 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178384 |
|---|
| Protein GI | 219115177 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGC AGATTTTCAA CGAAACAAAA GCGTCGACGC GGCTCCATTT TGTCGCCACG
TTTGGTCTAG CCAAAGCCCT TGCCAACGCC ATGAGTGGTA GTCTGGCTGA TACGCTTGGC
CGGAAACCAG TACTGATTTT GGGCTGCTTG GTAGGCTTGC CCGTAATGCC CTACGTTATT
GTGGCGAATT CTTGGAGCGG CGTTACACTC ATGAATGTTC TCTTTGGACT GTCACAAGGG
TTGCTAGGCT CTTCGCTTTT CTTTTTATTA ATTGATCTAA TGGGATCACG TCGTAGGGGA
ATCGCTGTGG GTATGGGAGA ATCAACAATT TACGTTTCGA CTGCCATTGT AAACGTTCTT
GCAGGGCGAC TTGCTTCAGT GTACGGGTTT CGACCTGTTC CTTTTTATGT GGCAACCTCA
ATAAGCGTGT TGGGACTTTT GTCGACCATA CCCCTGCAAG ATACTTTGGA TCAAGTGAGG
GCCGAACAAA CAGAATCCGA ACGGATCAAT CGGAAGAAGT ATGCTCGGTT ACTGAGTACC
CAGCCCAGTA AGCTGGACGA AGAGCGAATA GACACTCCAA ATTGCACTGA TCGTAGCCGT
CTCGATACCA CCAATTGCGG CATCGGCGAG ACTTATGGTA GTGTAGATGA AGGTTACGTT
TCCCCGTGGC GGATGTCGAC GCACACGCTG GATACGACTG ATAAGGAAGC GGTGAAGGAA
AATGACGGTG ACATGGAGAC TCAACCGATG ACCGCATTTT CATTTGCTAC TTCTTGCTAT
GTGTCAACCA GCCGCAGGGA TCAGCGGACC AGTTCTGGCC CTCTACGTTC TGTTAAGATG
TTGAAGTCGC CAGAGACGAG CTTAAGCTCA CTTCTTTTAA AGAATCGGAG CTACGTCGCT
CTTTGCTTCG GAGGCATGTC GTTGAACTTC AAAGACGGTT TTTGTTGGGG TTCATTCCCG
GTCTTCTTCA AACATGAACA TGGCTTGAGT GACGTGCGAA CTGATTGGTT GATTGCTATC
TATCCTTTAT GTTGGGGCAG TGCCCAAGCT TTTACTGGGG CTTTATCTGA TCGTTTTGGT
CGCAAATCAT TCCTGGTAGC AGGGGTAGGA TGCTGTGCGG TTTCAATGGT CATCTATGTA
CTTCCTTCGT ATTGCTGGGG TGTAGCGGCA GGTTCCAAGC ACTTTCATGT TTGGGTGGCC
GCGGATGTGT TGTTAGGATT TGGGACCGCA TTGGCATATC CGGCACTACA AGCTGGTGCG
GCCGATGAGG TAGATCCTGC CTACCGCGGA CTCGCACTCG GATTCTACCG CTTCAGTAGA
GATATGGGCT ACGTACTTGG AGCGATCGTT TGTGGCCCTC TTACGGATGC GATTGGCTAC
GAGGACACAT TTCTGGTGAA TGGAACCGTA CTTTGCCTTG CTTTTATATT ACTGCTTGTG
TTCTATTCAG ACGATCAGTC TGAACAAACC TTTGAATTCA GTACTGCCAC AGATGCAACT
TTTAAGCCTT CCCCTTTTAC CGCAGGGAAA TCACGAATAC TAACCGCCGG GATTTCAGAT
TCATGGTGA
|
|---|
| Protein sequence | MAVQIFNETK ASTRLHFVAT FGLAKALANA MSGSLADTLG RKPVLILGCL VGLPVMPYVI
VANSWSGVTL MNVLFGLSQG LLGSSLFFLL IDLMGSRRRG IAVGMGESTI YVSTAIVNVL
AGRLASVYGF RPVPFYVATS ISVLGLLSTI PLQDTLDQVR AEQTESERIN RKKYARLLST
QPSKLDEERI DTPNCTDRSR LDTTNCGIGE TYGSVDEGYV SPWRMSTHTL DTTDKEAVKE
NDGDMETQPM TAFSFATSCY VSTSRRDQRT SSGPLRSVKM LKSPETSLSS LLLKNRSYVA
LCFGGMSLNF KDGFCWGSFP VFFKHEHGLS DVRTDWLIAI YPLCWGSAQA FTGALSDRFG
RKSFLVAGVG CCAVSMVIYV LPSYCWGVAA GSKHFHVWVA ADVLLGFGTA LAYPALQAGA
ADEVDPAYRG LALGFYRFSR DMGYVLGAIV CGPLTDAIGY EDTFLVNGTV LCLAFILLLV
FYSDDQSEQT FEFSTATDAT FKPSPFTAGK SRILTAGISD SW
|
|---|
| |