Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44395 |
Symbol | |
ID | 7197860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 420538 |
End bp | 421563 |
Gene Length | 1026 bp |
Protein Length | 313 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178223 |
Protein GI | 219114855 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00014935 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AAATCGTTTC TGCAGAAGAA AAAGTTCTTG GGGGTCCATC GTAAAGAGCC ACAAAGGACG CATTGCCGGT CCCCGCCATC ATTACCATGA CAGAAGAATT GAAGTCAAAG CGCAAACGCG AGAAGAAAGA CAAGAAAAAG GGCAAGTTGC AAGCCGAGAA GGAGGAGAAA GAATCCGAGG TGGTGACACC TCCTCAACCT AATGATGAGG AAGAACCGAT CAATCCTGAC CAACGGGAGG CAGGTGAACA CGAGTCCAGT AAGGCGAGCA AAAGGCGCAA GACGAATGGC AAAGAATCTC GGGAGGAGCG CCAGAAGAAA CGCAAGGAAT GCATGGATCA GGTTCCCAAG GTCGACGAAC ACGGTATTGC GTACACAAAA CTGCAGCTTC GTCGAATGAG CAAGCGTGTG GCACGTGGAT TAGACCCAAT TGAATCCGAA CAAGAGGTGC GAGAACGGTT GCGGCGTGAA GCAGAACTTA AACGAGAAGA AGCTGCCGAA CTAGCTGGTA TGGATTACAA CGAAGGGGGC GATAACGCTA ACGATCCGGG AGAGAGTGAT ACACAAGAAA GGGTAGAGGA GGAAGATGGT GATGACGGCA GGGAGAATCA AGTCGACAAA GAAACCAGCC CGCCTGTTGT GAAAATATCC AAACGTAGCA AATTAGTCCC TCCGGACTAT ACATGCCAGG CTTGTCAGAA CAAGCATAAA CCATCTCACT GGATATACGA TTGTCCAGAC AAGGTTCGCA TGCCTGGTAC CAATCATGTT GCCAAAAAAG CCAAAGGATT GCATGACCCT GACGCTCGTA AACTCTTCGT GTCGGGTCTA CCCTTTGAGG CCAAAGTCAA GGATATCAAG GCTATTTTCG TTTCGTGTGG AAAACTGGCT CATTGTAAAC TTATCAAATT TGCTGACACG GGACGGTGTA AGGGGCAAGC CTTGCTTGCT TTCGCCACGG AAGAGGCTGC GGAAAAGGCG CTCGCTTTGG ACGGCAGCAC TTTGGACAAT ATGCCATCGA AGAAAG
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Protein sequence | MTEELKSKRK REKKDKKKGK LQAEKEEKES EVVTPPQPND EEEPINPDQR EAGEHESSKA SKRRKTNGKE SREERQKKRK ECMDQVPKVD EHGIAYTKLQ LRRMSKRVAR GLDPIESEQE VRERLRREAE LKREEAAELA GMDYNEGGDN ANDPGESDTQ ERVEEEDGDD GRENQVDKET SPPVVKISKR SKLVPPDYTC QACQNKHKPS HWIYDCPDKV RMPGTNHVAK KAKGLHDPDA RKLFVSGLPF EAKVKDIKAI FVSCGKLAHC KLIKFADTGR CKGQALLAFA TEEAAEKALA LDGSTLDNMP SKK
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