Gene PHATRDRAFT_44395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44395 
Symbol 
ID7197860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp420538 
End bp421563 
Gene Length1026 bp 
Protein Length313 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178223 
Protein GI219114855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00014935 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAATCGTTTC TGCAGAAGAA AAAGTTCTTG GGGGTCCATC GTAAAGAGCC ACAAAGGACG 
CATTGCCGGT CCCCGCCATC ATTACCATGA CAGAAGAATT GAAGTCAAAG CGCAAACGCG
AGAAGAAAGA CAAGAAAAAG GGCAAGTTGC AAGCCGAGAA GGAGGAGAAA GAATCCGAGG
TGGTGACACC TCCTCAACCT AATGATGAGG AAGAACCGAT CAATCCTGAC CAACGGGAGG
CAGGTGAACA CGAGTCCAGT AAGGCGAGCA AAAGGCGCAA GACGAATGGC AAAGAATCTC
GGGAGGAGCG CCAGAAGAAA CGCAAGGAAT GCATGGATCA GGTTCCCAAG GTCGACGAAC
ACGGTATTGC GTACACAAAA CTGCAGCTTC GTCGAATGAG CAAGCGTGTG GCACGTGGAT
TAGACCCAAT TGAATCCGAA CAAGAGGTGC GAGAACGGTT GCGGCGTGAA GCAGAACTTA
AACGAGAAGA AGCTGCCGAA CTAGCTGGTA TGGATTACAA CGAAGGGGGC GATAACGCTA
ACGATCCGGG AGAGAGTGAT ACACAAGAAA GGGTAGAGGA GGAAGATGGT GATGACGGCA
GGGAGAATCA AGTCGACAAA GAAACCAGCC CGCCTGTTGT GAAAATATCC AAACGTAGCA
AATTAGTCCC TCCGGACTAT ACATGCCAGG CTTGTCAGAA CAAGCATAAA CCATCTCACT
GGATATACGA TTGTCCAGAC AAGGTTCGCA TGCCTGGTAC CAATCATGTT GCCAAAAAAG
CCAAAGGATT GCATGACCCT GACGCTCGTA AACTCTTCGT GTCGGGTCTA CCCTTTGAGG
CCAAAGTCAA GGATATCAAG GCTATTTTCG TTTCGTGTGG AAAACTGGCT CATTGTAAAC
TTATCAAATT TGCTGACACG GGACGGTGTA AGGGGCAAGC CTTGCTTGCT TTCGCCACGG
AAGAGGCTGC GGAAAAGGCG CTCGCTTTGG ACGGCAGCAC TTTGGACAAT ATGCCATCGA
AGAAAG
 
Protein sequence
MTEELKSKRK REKKDKKKGK LQAEKEEKES EVVTPPQPND EEEPINPDQR EAGEHESSKA 
SKRRKTNGKE SREERQKKRK ECMDQVPKVD EHGIAYTKLQ LRRMSKRVAR GLDPIESEQE
VRERLRREAE LKREEAAELA GMDYNEGGDN ANDPGESDTQ ERVEEEDGDD GRENQVDKET
SPPVVKISKR SKLVPPDYTC QACQNKHKPS HWIYDCPDKV RMPGTNHVAK KAKGLHDPDA
RKLFVSGLPF EAKVKDIKAI FVSCGKLAHC KLIKFADTGR CKGQALLAFA TEEAAEKALA
LDGSTLDNMP SKK