Gene PHATRDRAFT_44298 details

Gene Information

• Locus tag: PHATRDRAFT_44298
• ID: 7197961
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: +
• Start bp: 149577
• End bp: 155576
• Gene Length: 6000 bp
• Protein Length: 1736 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002178175
• Protein GI: 219114759

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCAAG TGACGGACGA TTCGGTGGTA TTTGTTCCAA TTGATAACGA CATTGACGTG 
ACGTCCACGC AGCGGGAAAC GACAGAGGCT CATCCGTCGG AGGTCGAGTC GAATGCAGCC 
TGCAGGGTCT CATCGGGAAC GACCCTTTCC GACCTTAGTT CTAACGCTGG TGAAGCCGGT 
ACGTCGCAAT CACAATCACA GCAACCTCCG TCACGTACAG CGGGTGCTAT GCACATGTCA 
CGGCATTCCG ACTTTACGTT ACCAACTTCG AACATCTTTT TGGGCTCTCT ACCAAACTCG 
ATCGCTAGTT CGTTCGACGA CAAGCACAGC GCGTCTTTGG TTCCGCGGCG TAATATTTTC 
GGAAGCACAG TCCAACAGCA ATACGGAAGG AATCACGTCA GCGACGGTAT GGGTAGTAGC 
GGTTTCGGCC CACCAGCAGC GGGCTCGCAA TACTCAACCA CTGCTGCGGC AGCAAATCCT 
GCTCTGACTC TTACAACAAT GCTACCAGCT TATTTGACAA CCGGTAACCC TTACAGTGCA 
CGCTCTGCTG CAACGCTTGC AGCAGAGAAC CACAGGCTTT TACCAGATGG GTTTTCTGGA 
CAGAATACGG ACCATGAGCA AACTATAAGC TCTCAGTCAT ATCCTCTGTC ACTGGAATCT 
GCGTACCAGA TTACGGCACA TCATCATCAT GACTACGACC GCAACGACTC GCTCATGTCT 
TCGTTGACCC TTCCCGATTC TCTACATTGT CGCAACGGCA TATCCTTTTC GGCGGCCACG 
CAACTACCGA TAGCACCGTC GCCTCTTCTG GAGCATGAAA GAATAAAGCA TCATAGTCAC 
CGGGTCCACG AAACCCTTCA CGCACAATCA CTACTACTGG GCCTGGCTTT TTGCATGGTC 
TGGAGTGCGT CAAACCTTAT GGCCCCAAAC TTGACCGAAA TGGCCTTATT CTACGATTTT 
GATCACGTAC AACGCGATTT ATATCTTGGT TCATACTGTG CACTTGCCAC AGGAGTATTA 
AGCTTCCCCA TTGGAGCTGG CATTGGCATA TTGGCGGATG TGGTGTCGTC TCGTCAACGT 
CTCTTTGTGG CAACAGTCAC GGGAGCGGGC TTGTCCAGTA TAGCCACGGC GTTCTATACC 
GACGCCTACT GGCAGCTCTT TCTGTGTCGC CTAATCAACG GTGGGTTCAT GTCTGGCTCC 
GTGCCCGTCG TGTTTTCGTT TTTGGGGGAT TTGTTCGCGA CGGAAGAACG CAATACAGCC 
AGCAGTGGCT TGACCGCCAT GATGGGGCTG GGAATAATAC TGGGACAAGT GTATGCTGGA 
ATGATTGGTG GAGGGATTTT GTCAGGGACT GTCTTGGACG TAAACGAAGC AGAGACCGAA 
GCACACACAG CGTGGCAACA CGCGTTTGTT GTGTCGGGTA TTTTAACATT AATATCGGCA 
GTCTTGTGCG GCTGTTTGGT TCAAGAACCC GTGCGGGGCG GCAAGGAAAA GGTGCTACAA 
GATATGCTGC AGGCGGGAAC GCGGTACGAA CGGAAATTGT CTTGGCAAGG GTTCTGGCAT 
GCTATGCGAC ACAACCAAAG CAATCTGATA CTGCTATGGC AGGGGTTCTT TTCTTCGCTA 
CCGTGGGGTA TCATATTTGT TTTTTTGAAC GACTATCTGT CGCAAGAACG CGGTTTTAGT 
GTGCCGGAGG CTACCTATTT GGTGCTGTTG TTTGGTTTGG GCTGTGCCGC GGGTGGAATT 
CTGGGCGGCT ACTGGGGACA GAAAGTGCAA TCTTACCGTC GGTCCTATTT ACCACTATTT 
ATGGCCGGAA CGACGGCTGC CGGCATTTTG CCGTTTGTGG GTTTACTCAA TACGCACTTC 
ACCAATGCGC ACGGCGTTTA CGGGTTTGTA TTTAGCTTTG GTGGTGGTCT CGTAGCGTCA 
TTGCCGGCGG TCAACGTTCG TCCCTGTCTC ATTAACGTGA ATCCACCGGA AACGAGGGGA 
GCCTCGTTGA CGGCGGCTAA CCTACTCATT AACTTGGGTC GCGGATTCGG ACCGAGTTGC 
ATTACCCTAA TGGGATCGAT TTTTAATGTG GATCGGCAGT ATGCGTTTAA TGTCACGGTA 
CGTTTCGAGG TGATATGTGT GTGTGTGTGT GTGTGTTTTC GGTGCAAATG GCCGGAGATC 
ACGGGTCGCT TCTTGATTGT TTTGTCTCAT TCGCCTACTT CTGCTTTGGT CGTTGTCAGT 
TGATTGCGTT TTGGTTGATT TCGGCTCTCC AATTATCGTT ATTGGCCCGT ACATTACCAA 
ATGATCAGGA TGCAATGGAG GCCGAGTTGG CCTCGTACGC GCAGAAAGCC ATCCGGGAGC 
AACAAGGCCA ACACGAACCC CCCGCGTGGG ACGATACGGA CGGTTCGGAC CGTGACGAAA 
AGGAGGAGGA TGACGACAAT GACGGTGCTG GTGATGCGCC CAATCTGGTG AGTTTGGAAG 
AACGCATGAC TTCGTGGGAC GGCAAGGCGG CCCGGGAGAC GTTGGAATAC GTGCGTCGGG 
GTGTCCGTGA GTTCCGGGAG GAAGTAATGT CCGGCGGTTC CAAGGCTCTG TTGGGTCCGT 
TCGGATGTGC GGACGGTATC AGTAGTGAAG ACGAAGAGGA GGAGATGACC ACCCCCCGCA 
CCATGCTCCG TAAACGGGAA CAATGGAAAC GCGCCCAAGT GATTCGCAAC CAAATTGCCA 
TGGACGGTGG TACGAGCGAC GCGCCCGCGT ATCCCACGGA ACGCACCCCC TTGGTGGTTT 
GACGCCACGC GTGTGTTGGC GTTGCCCTTG GAGTGGATAG AATTGAATTC CTAGAAATAT 
TAGAGTTTCT GGACTGGCTT GTTACATTCC TGCTAGTACC CCGTAGACCA CCGGGACGGA 
AGGGAAACCA ATGCGGGATG ATTGACTGTG CGTTTGGGAT TCGTGTGGTA CTTTTGGTTA 
GGGTAGTAGT CTCCTTTCCT ATTTCCTCAT AGGGGAAGAA TAGTGTGGGA TTGGATCCGA 
ATCGGTAGCG GACGCCGTAC GAACGGGAAA AGCTTCCGTA CGCGGTCTCA CGAGAAAAAA 
GTCCGACGGT ACACGCACTA CCGTACCAGG TAGTAGGTAT AACGCTCGAC TGCGCACGTT 
GTCAGGGTGC CGTACGAACT GTAAAAAAAA CGTACGGAGA CCCCCACTCC AGCAACGACC 
GAGAGAGGAG GATCCGGTTC TTGCCGTACA ACGACACTTT TTGATTTCCC GGAACTCGCA 
CCTATCCTGG GTAACCCTCG TGTGTTGTTC CAGTAGTCGT TCGACAGTGA CGTGTAGAAT 
AACACCAAGT CAACGAACGA GACAATCAAT CATGAGTTCC AAACCAACGG TACGTCTAGT 
CTAGCGTGAG GAATGACACG GTCTTCTCGT GCGGCGACAT GGGGGGTCTT GATTTGTGCC 
GGTATGGTGG GGGTGCATTA TCCTGTTGGT TCGCAAAGGT GTCAAGTGAT GCGGGAATCA 
ACGGATCGTC GTTTGGTTGG GTAGATATTC CTGGACTTTT GCTGTAAGAT TCGTCTCACA 
AACGTTCGGA ACTTGTTTGG TTCTCTCGTG TTGCGCGATT GTGTAGACTT CCAGTGCTGG 
TAGTAGCGGT ACTGGTAGTG CTGGTGGATG GGCCAACAAG CCTTCGTCTA TCCTGCAAGC 
CACTGCGGCC GACGTTGGGA CGCCTCCCGC CGTGGGGACG CGGTGGGCCA CGGTCTCCGC 
AACACCCCGT CGCACCAACA GTGCCGACGT TGGTCGCGCC CCGCGTCGCA CCCACAACAA 
CAACAACAAC AACAACAACA ACAAACCGCA AGGAGAAGGC CACACGAGTC GTTGGAACAA 
TAACAACACC AAAACGGGAC GTGGAGGCGG ACGAGGAACG GCGGGTGGCC ACCACTCCCA 
CCGTACGGGG GGAAACGTGA GTCACACACC CCACCACCAC CACCAGCACA ACAAAGAACG 
AAAAGCGCCG GCCAAGACGT CGTCCAAAAC TCCCATGGTG AATTTGAAAG ATGTGACGCT 
CTTTACCGAA ACTGGAACAG GGAACACGGC ACAGGAAAAG GTCGTGGTTC GTCTCTCGAT 
GGAGCATTTT CTGGCGACAC GACTGAACTA CCTGGACCCA CCGACGGTGT CGGCCGACGG 
TGAATCATCC CACTGGACTC CGCACGCGCG TTGTATTTGG ACGAGTCAAG ACCGGGGCAA 
CCAAATTCAA GAAGAAATGA AAGCCTTGTG GGATTACAAG CCCCTCGAAG TCAACGACGA 
CACCCGCTGG AAAGCTCGAG TCATGGAGGG CCAGAATGAA ACCGCAACGT CGGACTCGCC 
CGAAGAAATT CTTCGCAAAG CCACCGCCAT TCTCAACAAA CTTTCCTGGA CGACCTTGGA 
CAAGCTGACG GTCCGCTTCG TGGAAACGCT TAGTGGCGGT GCCAAGAGTA CCCACGGCGA 
CGCCGACCCG TCCCTCTCCA AAGAGACGGT GCGCGGCACC ATGCAGATGA TTGTCGACAA 
AGCCATGGCG GAACCCCACT TTGCCGAACT CTACGCACGC TTCTCCGGCA AGCTAGCGGC 
CGTGCACAAA ACTTTCAAAA AGATGCTGTT GAGTATTTGT CAGGAACAGT TCGAGATATC 
CGACAAGGAA CCTGAGTTTC CGGCAAGTAT GGACCCCGCC GAAAAGGCGT ACGAGCTGTT 
GCAATCACGT AAGCAATCGA TCGGGCTCAT GGCCTTTATC GGTGAGCTCT ACAAGCTGAA 
ACTCATTAAG GGTGCCATTA TGATTGGTTG CCTGCAACGC CTAATGGTAA TTGATGACGA 
AGAAAAGCTC GAATGCTTTA CCAATCTCAT GGCGACCATT GGGGCTCGCT TGCACGAGCA 
CGAGAACGAA CCCGAGGTGC ACGAAATTTG GGAAAAGCTA TATTCCATGG CCGGTAAGAC 
GAACAAGACG ACCGGACCGA AGGCGCCCAG CACGCGCATC AAATTTTTGT TGCAAGACTT 
GATCGAACTG AAAGAGAATA ATTGGGTCAA ACGCCGAGAA GAGGAAAAGG CCAAAACTAT 
CGCACAAATC CATAAAGAAG CGGCGGAAGC GGAACGCTCG GCGTCGAGAA ATGGTCCCGT 
TATCAACACT AACAGCAGCA GTCATAAGAA AGTAGCTCGC TCCCATTCGG CTTCTCTGCC 
CAACACGCGG TCGTCTTCTT CTTTACAAGG CCAGGAATCC TTTCCGGATG GTGAAGGCTT 
TATGCAAGTA CCCAACAAGC CAAAGAAAAA CTCCCTGCGA CGTGCACAAT CAGATTCTAT 
TCCGGACGCA ACGTCCGGTA TGAGCAGTTT GCAGCTCGCA ATGTCGGGGA AAAATAGCAA 
AACCTCGGCA CGGAAAAGCA GTGGTGGAAG CAGTCAACGT CCAGCGAGTC AAGCCCCGAA 
AATTGCGGAA TACTTGGATC CGAAGCAAGT GGGTGAAAAG ACCAAAACGT TGCTCAAAGA 
ATACTTTGTC TCTGGTGACA CAGCAGACGC TGTATTATCC TTCGATGATT TGATTGGAAA 
ATCGCACAAT GGCGACGTTA TTCGTGGAGG CGCGGTTGTT GAGGCTGGTA TATTGCTAGT 
GATGGAAATG AAAGAGGAAG ACGTAAAGAA GTTTTTGATG GTCACGGCGG CGCTTCTGAA 
ACAGGGGAAA ATCCCCCTTG CATCTTTTGC TAAAGGTATG AACAACCCGT TGGAGTCCCT 
GCGGGACATT GAGATTGATG CTCCAATGGC TGCTAAGCAT CTGGCCAGGA TTATAGCATC 
GTGGCTTTCA TGCAACGCTT TGTCGATCGA TTTTCTGCTC GGAGCGCCCG AATATTTCTT 
GTCCGATGGC CGACCCGCAG CGTTGGCCAA GCAAGTCTTG CAAATTCGTG GTGGCAACGT 
GTCGGACGAA GAAGTTAAGG TGGTGACGCA ACTCATGAGT GAGGAGGAGA AAAAGAATAT 
TGCATCTGTC AAAGAGTGGC TCCAGTAAAG TTGACGAGTA GTAGTAAACA TTTCGTGTTG 

 

Protein sequence

MDQVTDDSVV FVPIDNDIDV TSTQRETTEA HPSEVESNAA CRVSSGTTLS DLSSNAGEAA 
GAMHMSRHSD FTLPTSNIFL GSLPNSIASS FDDKHSASLV PRRNIFGSTV QQQYGRNHVS 
DGMGSSGFGP PAAGSQYSTT AAAANPALTL TTMLPAYLTT GNPYSARSAA TLAAENHRLL 
PDGFSGQNTD HEQTISSQSY PLSLESAYQI TAHHHHDYDR NDSLMSSLTL PDSLHCRNGI 
SFSAATQLPI APSPLLEHER IKHHSHRVHE TLHAQSLLLG LAFCMVWSAS NLMAPNLTEM 
ALFYDFDHVQ RDLYLGSYCA LATGVLSFPI GAGIGILADV VSSRQRLFVA TVTGAGLSSI 
ATAFYTDAYW QLFLCRLING GFMSGSVPVV FSFLGDLFAT EERNTASSGL TAMMGLGIIL 
GQVYAGMIGG GILSGTVLDV NEAETEAHTA WQHAFVVSGI LTLISAVLCG CLVQEPVRGG 
KEKVLQDMLQ AGTRYERKLS WQGFWHAMRH NQSNLILLWQ GFFSSLPWGI IFVFLNDYLS 
QERGFSVPEA TYLVLLFGLG CAAGGILGGY WGQKVQSYRR SYLPLFMAGT TAAGILPFVG 
LLNTHFTNAH GVYGFVFSFG GGLVASLPAV NVRPCLINVN PPETRGASLT AANLLINLGR 
GFGPSCITLM GSIFNVDRQY AFNVTLIAFW LISALQLSLL ARTLPNDQDA MEAELASYAQ 
KAIREQQGQH EPPAWDDTDG SDRDEKEEDD DNDGAGDAPN LVSLEERMTS WDGKAARETL 
EYVRRGVREF REEVMSGGSK ALLGPFGCAD GISSEDEEEE MTTPRTMLRK REQWKRAQVI 
RNQIAMDGGT SDAPAYPTER TPLRTPYERE KLPYAVSREK SPTVHALPYQ VSSVRNDTVF 
SCGDMGGLDL CRYGGGALSC WFAKVSSDAG INGSSFGWVD IPGLLLAGSS GTGSAGGWAN 
KPSSILQATA ADVGTPPAVG TRWATVSATP RRTNSADVGR APRRTHNNNN NNNNNKPQGE 
GHTSRWNNNN TKTGRGGGRG TAGGHHSHRT GGNVSHTPHH HHQHNKERKA PAKTSSKTPM 
VNLKDVTLFT ETGTGNTAQE KVVVRLSMEH FLATRLNYLD PPTVSADGES SHWTPHARCI 
WTSQDRGNQI QEEMKALWDY KPLEVNDDTR WKARVMEGQN ETATSDSPEE ILRKATAILN 
KLSWTTLDKL TVRFVETLSG GAKSTHGDAD PSLSKETVRG TMQMIVDKAM AEPHFAELYA 
RFSGKLAAVH KTFKKMLLSI CQEQFEISDK EPEFPASMDP AEKAYELLQS RKQSIGLMAF 
IGELYKLKLI KGAIMIGCLQ RLMVIDDEEK LECFTNLMAT IGARLHEHEN EPEVHEIWEK 
LYSMAGKTNK TTGPKAPSTR IKFLLQDLIE LKENNWVKRR EEEKAKTIAQ IHKEAAEAER 
SASRNGPVIN TNSSSHKKVA RSHSASLPNT RSSSSLQGQE SFPDGEGFMQ VPNKPKKNSL 
RRAQSDSIPD ATSGMSSLQL AMSGKNSKTS ARKSSGGSSQ RPASQAPKIA EYLDPKQVGE 
KTKTLLKEYF VSGDTADAVL SFDDLIGKSH NGDVIRGGAV VEAGILLVME MKEEDVKKFL 
MVTAALLKQG KIPLASFAKG MNNPLESLRD IEIDAPMAAK HLARIIASWL SCNALSIDFL 
LGAPEYFLSD GRPAALAKQV LQIRGGNVSD EEVKVVTQLM SEEEKKNIAS VKEWLQ