Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43701 |
Symbol | APC7 |
ID | 7197241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 1228773 |
End bp | 1230491 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177784 |
Protein GI | 219112065 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTA CCAGCAAGCT TCCCTTCGCG AGATACTCGC CCAGCGAGTC GTCCCACGAC GAAGGACCCC AGCCTTCGAC GCCACTGCAG TTGGAATGTT CCACTCTCTT TCGCGACGCA CAGCTCAAAA GTTGCGAAAT CCTTGCCCGT CTCGACCTGT CCCAGTCCAT TACGGAACAC CGTTCGTCGC AATTCGCGCT ACACATGTTG GGGGACTGCG AGTTTGCCAG GAAATCCTAC GCTCTCGCTA AAGCATTCTA TCACCGGTGC TACGTTTACG ACCAAAACTT GTATCGGTGG AAAGAGGCGC AATGCTTGCA CGCCGTGGGT TCGTTCGTCG AGGCCGCGTC CGTACTGGAA ACCGTCCCTA ACGAACACCG CACGATGCCC ATGAATATGG CTTTGGCCAA TCTTTACGTC GAGACCTCCC GCAAACCCGC AGCCGAGGAA ATCTACCGGA CCTGTGTGCG GCAGAATCCG TACGCGTTGG AAGCTCTAGA AATACTCTCC ATCGACTTTC AAGTCGAGAA GAGTGACTTG CTCACGCTTC TTCAAGAAGG TTTGGAGGCC CGGGGAGAAG GACCCAAAGT GCCGGATATT CTGCAAGATG TAATGATGGC AGCGGCGGCC ACGTCGCCCT TGTATCGTTC CAAAGCCGTG GAGGCCATGC ATTCGTGGAG TCGTTTCGAT TCCACCTATC CCAACAATAC TTACTTTCTC AAACTCAAGG CAACCGTACA GCTCCAATGC AACCACGAAA GAGGGGCCTT GGAAACCTTT GAGCACATTC GTAGCTTGGA AAACGCGACG CTGGAGCACA TGGACGAATA CGCAGAAATT CTCGTGCACA AAAACGACCT CGACGGCCTC AATGAAGTGG CCGACTCCAT GTTATTAGTG GACGACACCC GACCCCAACC ATGGGTAGCC TTGGCCTTGT ATCACCAAGC GCGTGGCGAT CACGAAAAGG CGCAAGCCTT TTGTGAAAAA GCCATTGACC TCGACCACCG CCACAGTCTC GCGCATCGAG TACAGGGTGC GATTTTCCTC GCAGACAATC GTGTGGAGCA CGCGGCCGTG GCCTTTTTCC GCGCCAATGA ACTCAAACGC GACGTTGTCT GCCTGGAGGG TCTCGTCGAT GCGTATTTGG CGGCCCATAA AGGCAAGGAA GCGCGTGATT GCGCCAAACA AGTCCTTACG TTAAGTTACG AGGAAGCCCG TTCCCAAGCA CTCCTTGGAT TGGCCATGGC CAAGGGCGCA ACCATTGTTC AGGGGCGGGA CCGGGATCTC GCCAAAAAGT ATTTGCGTCG AGCGCTATTG AAGGACCCCA CGGCGCCTCG TCCGTTATTC ACGTTGGTCG ATCTTTGTCT CCACCAGGAA GACTACGACG AATGTATCGC GATCCTCAAG AAAGGTCTCG AGGGCACGTC GGAGGCGTTG ACTACTGGCT TCCGCCAACC AGACCCGATC TATTGCCGCT TGGGCGAAGT GTATACCGAA ATGAAGTTGT ATACGGATGC ACTGGAGTGC TTCCACAACG CTTTGGCCAT CAATCCGGAC AATACGACGG CCGCCCGGGC TCTGGAACGG ACCGAGCGCC TGCTCGGTGG TACCGACCCC GAGTCCGATT TTCACGACGA AATTGTGGAG GACGCGCCGT CGCAGGAAAG TGACGGTGGT GGTACAGCCA TTCCGTACAA TGGCGGGGCA GAGTACTGA
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Protein sequence | MTTTSKLPFA RYSPSESSHD EGPQPSTPLQ LECSTLFRDA QLKSCEILAR LDLSQSITEH RSSQFALHML GDCEFARKSY ALAKAFYHRC YVYDQNLYRW KEAQCLHAVG SFVEAASVLE TVPNEHRTMP MNMALANLYV ETSRKPAAEE IYRTCVRQNP YALEALEILS IDFQVEKSDL LTLLQEGLEA RGEGPKVPDI LQDVMMAAAA TSPLYRSKAV EAMHSWSRFD STYPNNTYFL KLKATVQLQC NHERGALETF EHIRSLENAT LEHMDEYAEI LVHKNDLDGL NEVADSMLLV DDTRPQPWVA LALYHQARGD HEKAQAFCEK AIDLDHRHSL AHRVQGAIFL ADNRVEHAAV AFFRANELKR DVVCLEGLVD AYLAAHKGKE ARDCAKQVLT LSYEEARSQA LLGLAMAKGA TIVQGRDRDL AKKYLRRALL KDPTAPRPLF TLVDLCLHQE DYDECIAILK KGLEGTSEAL TTGFRQPDPI YCRLGEVYTE MKLYTDALEC FHNALAINPD NTTAARALER TERLLGGTDP ESDFHDEIVE DAPSQESDGG GTAIPYNGGA EY
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