Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43619 |
Symbol | |
ID | 7197340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 1001518 |
End bp | 1002334 |
Gene Length | 817 bp |
Protein Length | 241 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177735 |
Protein GI | 219111967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGCGAAAAAA AGAAATCCGA TTGATGTCTG CGCGCTTACT ACTAGAGACA ACATTCCCTT AGAAAGTAAA AAACCAAGTC TACGTTTCCA TATGACGACC GCGTTAATAT CGTCGCATGT CCTGGTGCTG GTCACTATGT GGCTTATTGG CGTGCAATGT TTCCCTGTTC AAAGTTACTT GGTTTCCGCA GGGTCACATC ATCGTCGAGT TCCAACCCCT CGGCCAACGC GAGGCGGAGT TAGCTTTTCT TCTCGACGCG CCAACACGTC GAACGACATC CGCAGCGAGG ATACGCTTTC TAACAGTAAG AACCGAATTC CTGTATCTGC CGAAATTGAA ATCCCTCTGG CCGCCGAAAT CGCGTTCGAC GCCTTCGCCG ATTTACCGAG ACAAGCCACC TGGGCAGATT GGCTCAAGTC GGTCGAATAT ATTTCACCGG ATAATCCCGA GACGATGTGG AAAATGAGTT ACTTGGGACT ATCGTACTCG TGGAAAGCTA TCAGTACGCG GCAGGAGCGT CCATTCGTTA TCGAATGGGA GTCTACATCG GGATTGAAGA ACTTTGGGAG GGTTGATTTT ACAAAGCTGG ACTCGGATCG CACGCACATG AAATTGACCT TGACATTTTT AGCTCCCCGA CTACTCGTCA AAATGCTGGG ACAGCAAGGG GCGATCGCTC GGCTGGTGGA AAAGCGAATG CTCCAAACCA TGCTGCACAA CTTTCGGGAC ATAGTGGTTG TTGAAAGCAC TAGCAATCAA CAGCCGCAAT TAAAACCGTT GAGCATCTTT CCAAAACAAA ATGCGGAGTC AGATTAG
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Protein sequence | MTTALISSHV LVLVTMWLIG VQCFPVQSYL VSAGSHHRRV PTPRPTRGGV SFSSRRANTS NDIRSEDTLS NSKNRIPVSA EIEIPLAAEI AFDAFADLPR QATWADWLKS VEYISPDNPE TMWKMSYLGL SYSWKAISTR QERPFVIEWE STSGLKNFGR VDFTKLDSDR THMKLTLTFL APRLLVKMLG QQGAIARLVE KRMLQTMLHN FRDIVVVEST SNQQPQLKPL SIFPKQNAES D
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