| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43574 |
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| Symbol | |
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| ID | 7197454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 850103 |
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| End bp | 851644 |
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| Gene Length | 1542 bp |
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| Protein Length | 499 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178020 |
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| Protein GI | 219112537 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.473905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCACGGTTAC CATAGATACC TCAGTCGTCT CTCAGCGATA CCATGCCCCC GTACGACGAT
GAGGAGAGGG ATCATCGCGT TACAGCCTCG GACGACGACA ATGATGTGGG GGAACAAATT
CGTGTGTCGT TGACGCTGGC GGTGGAATGC ACAGACCGCT CCCTCGAAGT ACCATCCGAA
GTCATTGCCG TTCCCGCCAC AATCGGTCGG CAAGGTCTAT CGGCTGTGAT CAATCATTTA
TTGGATCGAA GGATTGCCAA CGAAGATGGT ACAGATATGG AAGACGATGA AGAAGCAGAT
GATCGTTTGC CGGCTCTCAA ATTTGATTTC ATTCTGGGAA GGAATAACAA ATTGTTGCGA
ACTGGTGTCG AGAAGGAAGC CAGACGGAGT GGCATTAGTT TGGAAGAAGC AATTTTAGTG
ACATATTTCC CGGCTCAAGA AGCTCCCGAC TTTTCTGGTG AGAGTGAACC TCTCCCAGAT
TGGATTTCTG CCATGACCTT GGTGCAATCG ACGAGCAACC TTAAACTCTG CACTGCCACA
TACGACGGCT CCATACAAGT TTTCGAACCT AATTTGGAGG GAGGTAAAGA AAATTTGCGC
CTAACATCCG TCGGCAGTAA AAGCCGAGCT CACGTTGGTC CCATAAAGTC ATTGGATGCG
GCTATGAGCC AGGACGAGAC CTTGTGGGTT GCAACTGGTT CGATGGATCA ATCACTTGCT
ATACACTGTA TGAAGGTTGG AACATCGAAA CTACAACTCT TTGCACTTTG CAAGGAAGGC
CATGCAGCGG CTGTTGGCAG TGTCGATCTC GCAGTCCGTG ACAAAGTTCT GGCCAGTGGT
GATTGGGATG GCGGCGTCAG TTTGTGGGAC TTCTCAAACT CGGTGGATCC TATAGAGCAC
GCGCAGCCAC TTAAAAAATC CAAAACTGGC TCGACAACAT CATCTAAGAA GGAAGAATTG
TCCGCAAAAT TGCTGTCGCC AAAGATAAGT ATTCAAGCAC ACTCTTCCAA AGTGAGTGGG
TTGTCATGGG GCAACTTTGA AAAGACCCAG AATTCCAGCT TGGACCGTCT TATTACGGGA
AGCTGGGATC ACAGCCTAAA AGTTTGGGAT ATGGAGCGAC AAGACTGTCT TTTGACGCTA
AATGGGTCAC GGGTCGTCAG CTGCTTGGAT ACATCGTACC ATTCCTCTGG GATCGTCGCC
ACCGGACACC CTGATTGCAC CGTACGACTG TGGGATGTCC GTATCGACGC CACCAACGAA
TCCAGCCTTG CTCTCTCCGA CAATACTTTC AAGCCTAGTC ATAGAGAATG GATTTCGTCC
GTACGTTGGT CGCGAAGAAA TGCATACACA CTCGCTTCGA CAAGCCACGA TGGAACTGTG
AAAGTCTGGG ATATTCGATC GTCTATACCG CTGCATACGG TCCAAGCTTT TGACAAGAAC
CACAAGAGCT TGTGCATCGC CTTTGGAAGC CTCAAGGATA CCAACGACTT CATTTTTGCG
GGGGGAACAG ATTGCGTTGT GAAGGAGTAT TGCAATGGAT AG
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| Protein sequence | MPPYDDEERD HRVTASDDDN DVGEQIRVSL TLAVECTDRS LEVPSEVIAV PATIGRQGLS
AVINHLLDRR IANEDGTDME DDEEADDRLP ALKFDFILGR NNKLLRTGVE KEARRSGISL
EEAILVTYFP AQEAPDFSGE SEPLPDWISA MTLVQSTSNL KLCTATYDGS IQVFEPNLEG
GKENLRLTSV GSKSRAHVGP IKSLDAAMSQ DETLWVATGS MDQSLAIHCM KVGTSKLQLF
ALCKEGHAAA VGSVDLAVRD KVLASGDWDG GVSLWDFSNS VDPIEHAQPL KKSKTGSTTS
SKKEELSAKL LSPKISIQAH SSKVSGLSWG NFEKTQNSSL DRLITGSWDH SLKVWDMERQ
DCLLTLNGSR VVSCLDTSYH SSGIVATGHP DCTVRLWDVR IDATNESSLA LSDNTFKPSH
REWISSVRWS RRNAYTLAST SHDGTVKVWD IRSSIPLHTV QAFDKNHKSL CIAFGSLKDT
NDFIFAGGTD CVVKEYCNG
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